Gene
| Gene Model ID | pfu_aug2.0_79.1_30157 |
|---|---|
| Locus | scaffold79.1 : 357998 ... 368498 : - |
| To GenomeBrowser | scaffold79.1:357998..368498 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_5871.1_31065 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30157.t1 | 3 | 1 | Otopetrin | 59 | 75 | 0.0 | 290.4 | 0.48 | 7200.0 | -4.4 |
| pfu_aug2.0_79.1_30157.t1 | 3 | 2 | Otopetrin | 199 | 303 | 0.0 | 290.4 | 5.0e-27 | 7.4e-23 | 81.2 |
| pfu_aug2.0_79.1_30157.t1 | 3 | 3 | Otopetrin | 322 | 586 | 0.0 | 290.4 | 0.0 | 0.0 | 222.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30157.t1 | gi|676469679|ref|XP_009058610.1| | hypothetical protein LOTGIDRAFT_93639, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_79.1_30157.t1 | gi|524881893|ref|XP_005097594.1| | PREDICTED: otopetrin-2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_79.1_30157.t1 | gi|642920995|ref|XP_008192644.1| | PREDICTED: otopetrin-2 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_79.1_30157.t1 | gi|642920993|ref|XP_008192643.1| | PREDICTED: otopetrin-2 isoform X1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30157.t1 atgcctgtctgattctatggcgctgtgggaggaccgtaccttactgctctaaatatttactatagtgcttggtatcttac acaaataacgtctaagaattcagcatcttatgccaatttactgacttacgttctgttcagacagatatcgtccttactga agctgatatgtgggttatatgccctgatcctggtagttttgggcgtggtgttcgccgtctccacctctctcaccgccaag gaacgtgttcatcaattctacctggagattttcctcatttacctgtacctggcgtccctgagcgttctcatctacttcca agggtgcttgctgagtggcgtcaaagttaaaaataattactacgagaacaacatccgggtctcaatccgccatgacggaa gtgtcaagtctacgcctgcgtcaccatatccggtacgatccggtgacaatggtaagctggagagcgatcaggagccatta gaccaggagaagaaggattccacagtggaacgagtatccatcgccagctaccagagtcattttgaagtaccggcagaggg cgctgtggcacatgtcggcgaggggattaacttttatttgaggcttggcgcacttgcttttgcatttggaagcgtgactt tggatggttttcacatcgctacttattttgaaaccgttaccacggaaacgtgtgagagtccaatcttcatcttagtctac gtactccacctgctgtttacttttgtccaaaccttcttcttgttcaagaaccataagcttgttatcaataagaagaagcc gggagtgagattcggtatgatgcacttaatggccaccaacatctgtgtcctcatagtaaccgccgtcacggaaactaacg aagattaccgacaacaaaactaccacatggtcaaattcaacttttcaggtgtcaacatgactaagagctgttatgaggaa cttaccctcgcacgatctgcctctccttacctcttcccttgcacaatcatctacagtatcatcgctgctggtatcatcta tcgtctatatcagtacataggcgtacgaatcaaacaacgttggccgagccacacctctctcacaagctccgtgccggccg gcgccgcggccatcgactgtgagaaagccaacaaggggttgttcctcggtctcctggtagctgttttcaccctcattgct atcgcaaccttcttcgtgtttgagagcaggatcaacgacagcatcaccgccgtacaagttctgtttacgaccgaaattgt tctgatggtcataacaagtgtaggaattatctggggctacttgaggctgtctactctcaaattcatgaagcaagtcttct tttctgtggattcagtcttgctacttgttgccttggccggatcttacatctacttgtgttttactcttatttcggtatgc tcagacctctcaacatctaccactgtgagggtgctgtcgctactgacaaccgcttttgctttgtgccaaatcactttaca aaccatttttgtattggatggtttgtgtagatgcgcaaagaacgatgagcagacgatgcagaaacccggaagagcagttg tcaccttcctgttggtgtgcaacttggcgttgtgggtagttagcatgttcgaggtcaagaaaactcgcgtcgtacaagct catgaatcattttatggaatactcgcgtggaatatcataacacatctttgtgtccctctcgccattttcttccgcttcca ttctgctatttgtctgtccaaggtttggtataatgcctatcaaaaagagaaaatgccttga |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30157.t1 MPVXFYGAVGGPYLTALNIYYSAWYLTQITSKNSASYANLLTYVLFRQISSLLKLICGLYALILVVLGVVFAVSTSLTAK ERVHQFYLEIFLIYLYLASLSVLIYFQGCLLSGVKVKNNYYENNIRVSIRHDGSVKSTPASPYPVRSGDNGKLESDQEPL DQEKKDSTVERVSIASYQSHFEVPAEGAVAHVGEGINFYLRLGALAFAFGSVTLDGFHIATYFETVTTETCESPIFILVY VLHLLFTFVQTFFLFKNHKLVINKKKPGVRFGMMHLMATNICVLIVTAVTETNEDYRQQNYHMVKFNFSGVNMTKSCYEE LTLARSASPYLFPCTIIYSIIAAGIIYRLYQYIGVRIKQRWPSHTSLTSSVPAGAAAIDCEKANKGLFLGLLVAVFTLIA IATFFVFESRINDSITAVQVLFTTEIVLMVITSVGIIWGYLRLSTLKFMKQVFFSVDSVLLLVALAGSYIYLCFTLISVC SDLSTSTTVRVLSLLTTAFALCQITLQTIFVLDGLCRCAKNDEQTMQKPGRAVVTFLLVCNLALWVVSMFEVKKTRVVQA HESFYGILAWNIITHLCVPLAIFFRFHSAICLSKVWYNAYQKEKMP |
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