Gene
| Gene Model ID | pfu_aug2.0_79.1_30159 |
|---|---|
| Locus | scaffold79.1 : 435243 ... 459118 : - |
| To GenomeBrowser | scaffold79.1:435243..459118 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_6180.1_38275 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30159.t1 | 2 | 1 | W2 | 340 | 375 | 1.3e-22 | 79.5 | 3.5 | 10000.0 | -3.5 |
| pfu_aug2.0_79.1_30159.t1 | 3 | 1 | Hexapep | 492 | 526 | 1.4e-08 | 33.8 | 8.4e-07 | 0.0025 | 17.2 |
| pfu_aug2.0_79.1_30159.t1 | 3 | 2 | Hexapep | 526 | 558 | 1.4e-08 | 33.8 | 5.5e-07 | 0.0016 | 17.8 |
| pfu_aug2.0_79.1_30159.t1 | 3 | 3 | Hexapep | 562 | 589 | 1.4e-08 | 33.8 | 0.14 | 410.0 | 0.7 |
| pfu_aug2.0_79.1_30159.t1 | 2 | 2 | W2 | 780 | 862 | 1.3e-22 | 79.5 | 1.8e-25 | 5.2e-22 | 77.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30159.t1 | gi|676435233|ref|XP_009047490.1| | hypothetical protein LOTGIDRAFT_225095, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_79.1_30159.t1 | gi|742089809|ref|XP_010890241.1| | PREDICTED: translation initiation factor eIF-2B subunit epsilon [Esox lucius] | 0.0 |
| pfu_aug2.0_79.1_30159.t1 | gi|524891255|ref|XP_005102163.1| | PREDICTED: translation initiation factor eIF-2B subunit epsilon-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_79.1_30159.t1 | gi|390336438|ref|XP_784928.3| | 0.0 | |
| pfu_aug2.0_79.1_30159.t1 | gi|524938616|ref|XP_005071709.1| | PREDICTED: translation initiation factor eIF-2B subunit epsilon [Mesocricetus auratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30159.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30159.t1 atgctgaaagcaaagcaaaaccaaggttttctgaatgcaaagccgacaaagttctctaaacacaaagccaaaccaagatt ctcaaaaaaaaagccaaaccaaggttctctaaacacaaagccaagattctctaaacaaaaagccaaaccaaggttctcta aacacaaagccaaaccaagattctctgtacgcaaagtcaaacaaagcttctcaaaatgcacaaccaaaccaagattctct gaacacaaaaatcaaccaaggttctctgaacgcatagccaaaccaaggttctctgaatgcattgctaaagcaatgttctt tgaatacaaagccaaaccaaagttttcaaaacacataaccaaaccaaggttctctgcacacacagctaaacaaggttctc tgaacacaaaaccaaacaaaattctatacacagtcaaaacagtttctctgaataaaacaccaaaaccaaggttctctgaa tgccaatcaaaaccaaggttctctgcacatatagcaaaaccaagtttctctgaatacatgaccaaaccaatgttctctga atacaacaccaaaaccaagtactatgcatggtatgtagggaagatgaggagaaagagacagagactgagagagttacatg agggggtggacagggtgaaaaggagggggaggaacgggggcaggaggaaggagggaaggggaaggaaggggaaggggagg gaggaagagggaagcaaggtaatggtgaaaagaagggtgagggaggaggggcaggagggcagagatggttacgtcatcaa tggccatcaatggacattactgccagtggctaatgttgctatgttggattataccttggagtccttgacatcagcaggta ttcaggaaatctttgttttttgctgccaccatgctgacaaaatcaaagaacacatcagcaattccaagttttcgtctctg acttccagtacagtatctactatagtatcggatggctgtatgtccatgggggacgctttacgggaaatacacgataaatc tatcatacgtagtgacttcatacttatctacggggatgtcgtgaccaatgctaacttgagcagccttctggaggagcata aaaagtttgtactgcctaaggaggttttatccagcaataatgaggtgaccttgaggtatgaccttctgaactgccagatt aacatctgctccccacaggttccctcactctttaaggacaactttgattatcttactagagatgactttgtcagaggaat tttagagaatgaagaaataatggggtacacaatgtatataaaagtaatacaagatcagtacgcagccaggatatccaatc tacatatgtatgatgctgtcagtcgtgatatactgagtagatggagttatccaattgtacctgataatagttttatagaa gaacggagctctgtgacgtatggtagacataatgtatacctcagtaacgatgtcactttagccaggggttgtgaactaga gaagagtgtctatgtgggaagagggacttgtgtcggcagtaatacagttataaccaactcagtcatcggcaaggattgta gaataggagaaaatgtgaaaattgatggagcttatatatgggacaatgtgacaatagagaatagttgtagggtagaatcg tctatattgtgtaatggagtggtgctgtatgattcattacatgtatcacaaggatgtatactatcatgggatgtaaaagt tggtcccagtataacgatcccccgtggtacaaggctgaaatcatcacctgatgatgaagaggatgattttggagaggatt tacccgaagcagaccaagccacaaaggaaaacgcccaccattttggatctcggagtcaggcttacttgttccgtcttact caggatccgacagacagtgatgaggaagaggaggatcagctcatacatgacatgtttggactcgagatccagtctgagtc cgagtcagacactgagacagacttagacgagtctagtgaagataacatcatgggagatgacatggatgtcttctacactg aagctatagatacactgaaaaaatacaaaaacctgaaaatagacggtactagcacagagaatctcaaatttgaaattaac tcactcaaacattcgtacaatatcaatatccgtgacttatacgggctgattaccaaggccattatagatctaccaatgag agaagacgctaacctagatggaaaccagcttcttagcagcatgaaacagaatctgaccaagtatcagtcattgattaaga actacgtaagaagtggagagtcacagatggattgtctacattcactagaggatttctgccagaccaatgagaaagtacag agtttatttatgaagttgttacaccacctatatgaccttgacattctatcagagcaggcagtaataaagtggcacggact accacccatgggagataacacagaacttcacgtctccatcaggaaacaggtagctcctctgataaaatggctacaggaag ctgaagaggagtcatctgaagaggatagtgactag |
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Protein
| Protein ID | pfu_aug2.0_79.1_30159.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30159.t1 MLKAKQNQGFLNAKPTKFSKHKAKPRFSKKKPNQGSLNTKPRFSKQKAKPRFSKHKAKPRFSVRKVKQSFSKCTTKPRFS EHKNQPRFSERIAKPRFSECIAKAMFFEYKAKPKFSKHITKPRFSAHTAKQGSLNTKPNKILYTVKTVSLNKTPKPRFSE CQSKPRFSAHIAKPSFSEYMTKPMFSEYNTKTKYYAWYVGKMRRKRQRLRELHEGVDRVKRRGRNGGRRKEGRGRKGKGR EEEGSKVMVKRRVREEGQEGRDGYVINGHQWTLLPVANVAMLDYTLESLTSAGIQEIFVFCCHHADKIKEHISNSKFSSL TSSTVSTIVSDGCMSMGDALREIHDKSIIRSDFILIYGDVVTNANLSSLLEEHKKFVLPKEVLSSNNEVTLRYDLLNCQI NICSPQVPSLFKDNFDYLTRDDFVRGILENEEIMGYTMYIKVIQDQYAARISNLHMYDAVSRDILSRWSYPIVPDNSFIE ERSSVTYGRHNVYLSNDVTLARGCELEKSVYVGRGTCVGSNTVITNSVIGKDCRIGENVKIDGAYIWDNVTIENSCRVES SILCNGVVLYDSLHVSQGCILSWDVKVGPSITIPRGTRLKSSPDDEEDDFGEDLPEADQATKENAHHFGSRSQAYLFRLT QDPTDSDEEEEDQLIHDMFGLEIQSESESDTETDLDESSEDNIMGDDMDVFYTEAIDTLKKYKNLKIDGTSTENLKFEIN SLKHSYNINIRDLYGLITKAIIDLPMREDANLDGNQLLSSMKQNLTKYQSLIKNYVRSGESQMDCLHSLEDFCQTNEKVQ SLFMKLLHHLYDLDILSEQAVIKWHGLPPMGDNTELHVSIRKQVAPLIKWLQEAEEESSEEDSD |
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