Gene
| Gene Model ID | pfu_aug2.0_79.1_30162 |
|---|---|
| Locus | scaffold79.1 : 482939 ... 492338 : - |
| To GenomeBrowser | scaffold79.1:482939..492338 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_2244.1_08261 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30162.t1 | 1 | 1 | MIT | 12 | 77 | 3.2e-20 | 71.7 | 1.3e-23 | 4.7e-20 | 71.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30162.t1 | gi|260833450|ref|XP_002611670.1| | hypothetical protein BRAFLDRAFT_117100 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_79.1_30162.t1 | gi|348530862|ref|XP_003452929.1| | PREDICTED: MIT domain-containing protein 1-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_79.1_30162.t1 | gi|573902527|ref|XP_006638988.1| | PREDICTED: MIT domain-containing protein 1-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30162.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30162.t1 atgacagatcctactaaactggccggtgtggaatcatcagctataaatattctgaagcgtgcggtcgagcttgatcaaga tcgcaggtttgaggaggctgttgtctgctaccaggaggggctacaactcttacttgatgtcatgaaaggaactccggata aggttaaaaaggaaaagtacagagataaaatacaagaatacatgggaagagctgagcaactgaaagaacatgtgaaggta tccaaatcagagggcaaagttcatgagcagatacaaatagacaatgatgccacaggttacagctatagtgttatcttctc aagattcctggatcagttcctgacgtgtatagaaatagaagatccctatattaggtcaactcatcagatttataatttat tacggttctgcgagttagtggtaaaatctgcagcccccgtcacagaaataaaactaaccactggcagagatgatagtgct gatggccagaggcagcaacagaataaactacgtaatctgaagactagtctagccaatcataatgtcacgttacatgtgga atataatgatgatctacacgacagagaaattagatttaacaacggttggattgtaaagatagggcgaggtttggacatgt ataaggccacggagaataatttctgtattggattctgtgactttgatctacgtaaatgccataaaacaactgtggatatt ttccacaaagactacgtcagttcagccagtgattcagtaacgtga |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30162.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30162.t1 MTDPTKLAGVESSAINILKRAVELDQDRRFEEAVVCYQEGLQLLLDVMKGTPDKVKKEKYRDKIQEYMGRAEQLKEHVKV SKSEGKVHEQIQIDNDATGYSYSVIFSRFLDQFLTCIEIEDPYIRSTHQIYNLLRFCELVVKSAAPVTEIKLTTGRDDSA DGQRQQQNKLRNLKTSLANHNVTLHVEYNDDLHDREIRFNNGWIVKIGRGLDMYKATENNFCIGFCDFDLRKCHKTTVDI FHKDYVSSASDSVT |
|