Gene
| Gene Model ID | pfu_aug2.0_79.1_30165 |
|---|---|
| Locus | scaffold79.1 : 511541 ... 512278 : - |
| To GenomeBrowser | scaffold79.1:511541..512278 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_2244.1_08264 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30165.t1 | 1 | 1 | Histone | 44 | 104 | 1.9e-08 | 34.2 | 5.5e-12 | 2.7e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30165.t1 | gi|543748774|ref|XP_005515123.1| | PREDICTED: histone H4-like [Columba livia] | 7.0e-30 |
| pfu_aug2.0_79.1_30165.t1 | gi|498999566|ref|XP_004534128.1| | 7.0e-29 | |
| pfu_aug2.0_79.1_30165.t1 | gi|541977134|ref|XP_005441363.1| | PREDICTED: histone H4-like [Falco cherrug] | 8.0e-29 |
| pfu_aug2.0_79.1_30165.t1 | gi|390349209|ref|XP_001175640.2| | 2.0e-28 | |
| pfu_aug2.0_79.1_30165.t1 | gi|555960340|ref|XP_005892275.1| | PREDICTED: histone H4-like [Bos mutus] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30165.t1 atgccacatttaaaggagtggttgaccggattgtctcaggggaatgccactcctggattaggaaaaggaatgtatttacg tcggcgacgccgtgttatactaagagggaatattataccaaatcccgtcaaaccagccattaaacgtgttgctagaaggg gaggagtgaagagaacatctggacttaactatgaagaaacaagaggagttctgaaagtatttttggaaaacatcatgaaa gatatcgtacaatacgttgagagtagtaaacgaaaaacagttactgttgcagacgttgaatacgcactgaaatatcaggg aagaccaatgtatcagtga |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30165.t1 MPHLKEWLTGLSQGNATPGLGKGMYLRRRRRVILRGNIIPNPVKPAIKRVARRGGVKRTSGLNYEETRGVLKVFLENIMK DIVQYVESSKRKTVTVADVEYALKYQGRPMYQ |
|