Gene
| Gene Model ID | pfu_aug2.0_793.1_11185 |
|---|---|
| Locus | scaffold793.1 : 32756 ... 60885 : + |
| To GenomeBrowser | scaffold793.1:32756..60885 |
| Genes list of scaffold | scaffold793.1 |
| Synonym | pfu_aug1.0_14356.1_68735 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_793.1_11185.t1 | 3 | 1 | Lectin_C | 39 | 143 | 1.2e-33 | 115.9 | 9.8e-15 | 1.5e-10 | 41.6 |
| pfu_aug2.0_793.1_11185.t1 | 3 | 2 | Lectin_C | 182 | 293 | 1.2e-33 | 115.9 | 2.0e-16 | 3.0e-12 | 47.1 |
| pfu_aug2.0_793.1_11185.t1 | 3 | 3 | Lectin_C | 327 | 387 | 1.2e-33 | 115.9 | 5.2e-12 | 7.7e-08 | 32.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_793.1_11185.t1 | gi|585716633|ref|XP_002742001.2| | PREDICTED: uncharacterized protein LOC100372598 [Saccoglossus kowalevskii] | 3.0e-19 |
| pfu_aug2.0_793.1_11185.t1 | gi|390335143|ref|XP_001197720.2| | PREDICTED: macrophage mannose receptor 1 [Strongylocentrotus purpuratus] | 5.0e-19 |
| pfu_aug2.0_793.1_11185.t1 | gi|701321842|ref|XP_010020031.1| | PREDICTED: macrophage mannose receptor 1-like [Nestor notabilis] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_793.1_11185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_793.1_11185.t1 atgatggccgcaggggcgctcatggtaagcatagctaatgaagttaaatttacagttaatttgttaaatcaaaaacgtag cacaagttgttatttttgggacgataacaatctacaaaacttctatagtgctcgtacggaatgtaatctcaaagatgcag atctgctagtcattaacgatgacgccgaacagaaatgggtgtgtgctatttctgcaaattcccaagcacatccaacagat ggctggttcataggattacagaagaagataaatatatggggatgggtaacaggacagggtgtgaccaacccgaattggat tcacgagccagataacccagttggtggatcacaaacatgtatttctatgaatcagtatggtagatcttgggatgatacct gtaatatgcattatggttatatctgccaatacacagctccacatggaacggcatgtcccatagatgaaggaaaagtgaag caccaattctcgcttgggaacacttgctactacgtgagcgatccattggactttaaggatcattatacttggagcggcgc taaggccaaatgcaagactatcaatccatcggcaactttactgatcatcaattcaatatataactatgcattcatccaaa ccattctaccatcaaatagtccgaatgttgtgataagatggtggacaggactgacgcaaaatccagggacgaatacatac gtatggcaagacggcacctcagcaaacatgagccttgtgacgtgggatagtgcacctggatcggacccctccacgcatac agactgtggtgtcatgtactccgggggtgtcataggggacgccaaatgttctagacgagccttctatatctgtgagaaaa gttcagacaaagaatacataaatcttggatgtggtccatggcagagagctggtaacaaatgttaccttttcggcaatggt agatcgttcaacaggagtatggccaggtctaaatgtcagtcagctggtggagatcttctgaaagtggataatgttgacga aaattactggatttcaaatagagagcttggcccctatgggttttggacagggctgacagatgcagcccaagagggcacat ggctctggacagatggatctaaggccgatacaacaaattatgtgctaactttttgctgtactgaatttttaagaatgaaa ctacatcagcctgtattaatggctttacaggacacggtctctcctgttattacattagtgacgccaactctactgatttt gtccggtggttggatgtcccagctagatgctcagatatggtccaagactacggcctaa |
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Protein
| Protein ID | pfu_aug2.0_793.1_11185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_793.1_11185.t1 MMAAGALMVSIANEVKFTVNLLNQKRSTSCYFWDDNNLQNFYSARTECNLKDADLLVINDDAEQKWVCAISANSQAHPTD GWFIGLQKKINIWGWVTGQGVTNPNWIHEPDNPVGGSQTCISMNQYGRSWDDTCNMHYGYICQYTAPHGTACPIDEGKVK HQFSLGNTCYYVSDPLDFKDHYTWSGAKAKCKTINPSATLLIINSIYNYAFIQTILPSNSPNVVIRWWTGLTQNPGTNTY VWQDGTSANMSLVTWDSAPGSDPSTHTDCGVMYSGGVIGDAKCSRRAFYICEKSSDKEYINLGCGPWQRAGNKCYLFGNG RSFNRSMARSKCQSAGGDLLKVDNVDENYWISNRELGPYGFWTGLTDAAQEGTWLWTDGSKADTTNYVLTFCCTEFLRMK LHQPVLMALQDTVSPVITLVTPTLLILSGGWMSQLDAQIWSKTTA |
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