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Gene
Gene Model IDpfu_aug2.0_794.1_14559
Locus scaffold794.1 : 26796 ... 52632 : +
To GenomeBrowser scaffold794.1:26796..52632
Genes list of scaffold scaffold794.1
Synonym pfu_aug1.0_5438.1_16659

Manual annotation
Annotation by Blast2GO
Annotation GO
glutamate receptor 4 isoform x3 GO:0005216 GO:0016020

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_794.1_14559.t1 1 1 ANF_receptor 4 316 2.2e-38 131.9 9.99967e-42 3.7e-38 131.2
pfu_aug2.0_794.1_14559.t1 1 1 Lig_chan-Glu_bd 347 400 1.3e-12 47.5 7.6e-16 2.8e-12 46.4
pfu_aug2.0_794.1_14559.t1 1 1 SBP_bac_3 352 694 6.1e-25 87.7 3.3e-28 1.2e-24 86.8
pfu_aug2.0_794.1_14559.t1 1 1 Lig_chan 455 730 0.0 175.4 0.0 0.0 174.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_794.1_14559.t1 gi|637286383|ref|XP_008106247.1| PREDICTED: glutamate receptor 4 isoform X5 [Anolis carolinensis] 0.0
pfu_aug2.0_794.1_14559.t1 gi|327269187|ref|XP_003219376.1| PREDICTED: glutamate receptor 4 isoform X3 [Anolis carolinensis] 0.0
pfu_aug2.0_794.1_14559.t1 gi|617592190|ref|XP_007520695.1| PREDICTED: glutamate receptor 4 isoform X1 [Erinaceus europaeus] 0.0
pfu_aug2.0_794.1_14559.t1 gi|617592196|ref|XP_007520697.1| PREDICTED: glutamate receptor 4 isoform X3 [Erinaceus europaeus] 0.0

Transcript
Transcript IDpfu_aug2.0_794.1_14559.t1
Definition-
>pfu_aug2.0_794.1_14559.t1
atgtcgattggagtctttcttttcttcggggtcaaggacgccatgacagtggacatagtagagtcatttacaaataaatt
ccacattccactggtgtccccttcattaacaaaggtcaagaacgttgcaagcagcttccagattcatatgaagccatcat
acacacgggccattatagacatggttaaacactacaaatggaaagttctctattacgtttatgattcgaatgaaggtctt
caacgattcgaagaggtgtacagtacgttgcatcgggatccaacattaaatataagtgtggttccagttaagttagagga
agtcgattattctcacgagattttgcgaagtttggatgtgatgtattacataggacttaaaacatttaccatcgacttgt
cttctttagatgcatatagatcacttatgcgacagatagctgaggttggcatgaatagagagggttatttttacctgttt
gcttgtcttgatttctccaagctagattttaccagattcctacacggcggcgttaatgtgacaggctttgatatcgtgga
ctcaaacagcgcagacgtcaagagttttcttagaaaatggcggtcggcgaatactaatatatatccctccgcaggggagc
ctttgatgtcagaatcagccatgtctgttgatgcattagagacaatagtttcggcactcgatatgatgttacaagaagac
agattcatattcaagaagaacttcagacggttaaaaatgttcaacttcaatggcaacataacaacgagagggattccgtg
tagtaaagttacaaaccttgatccgcctcctcagccatggcaacatggacaagaaatcctccaagccttaaaatcggtaa
tgtttaatggactaacagggcctgtttcatttgacgaaaaaggatacaggaaagattttgaacttctagtatcaactgtc
ggtattgatagacctcctcaacaggagccaccgtatctgcaattgagagatccgaagaataaaggcacaaccgcaaattc
ccgaatactaaatggtgataaatacgaaggttttatattagactttgcagagaagattgcagaggaattgaacgtgaact
tgaaattcagggaagtttccgatgaaaactatggagaggaaatttcgaagggtatttggaatggaatggtcggagaactt
aggaatggtactgctgatctagctatcgctccccttacaattacactggctagggaaaaggctattgacttcacaaaacc
ttttatggacgtcggaatctcgattatgatcaagaaaccggatatagaaaaacctggtgtattttctttcatgaaaccgt
tttctttgagtatatggatgtttatacttttggcatataccgccgttagtattgggctatttctggtgagcagatttagt
ccatatgaatggcggaaaattcttagttcggctgggatttcgtatgaaaatgacttttccctgatcaattcgttttggtt
ttctacaggagctttaatgttacagggtagcgatgaatgtccaagatctatatcggggcggatcataggaacagtatggt
ggtttttcgttctcataatcatatcaacctatacggcgaatcttgcagcatttcttactgtagagaatatggtcgccccc
atagaatcggctgatcagctagcagctcaggaccagattaaatatggctgccggaagtccggatcaactgagaaattctt
tgaggagaatcaggtgacgacttataggaacatgggtgcctacatgaagaataacccaagtgtaatggtagcaaccacga
gggaaggcattgagagggtgcgtaactctaaaggaaaatatgcactcttgatagaatctactatgaacgaatatgaaaac
agtagagagccttgtgatactctgaaagtcggcagaaatctcaacgcagaagggtacggtattgcaacgcctactggctc
aatatacagagatagacttaatcttgctgtcctgatgctacatgaagatgggacgttgttaagacttaaacggagatggt
ggcaggacaagagtcagtgtgcaccggaaggcactaaggagtcttctggtaagccttccttgtcgcttagcaatgtagct
ggagtattctacattttaattggtggattagtcattgcagttgtttttggcgcgttccaatttattgttaaacagttaca
tttagaaccaaagtacatcaccgcagagcgggatacatcatgtgatcgactgattcgaacaccctcagagcgagaaaatg
gagatctcaccgagtgtgcctccacgtctgcagatacctctctcaaagaacttcctcccattggttttgaagcatttaat
aatttacagaatcggccgaagatttag

Protein
Protein IDpfu_aug2.0_794.1_14559.t1
Definition-
>pfu_aug2.0_794.1_14559.t1
MSIGVFLFFGVKDAMTVDIVESFTNKFHIPLVSPSLTKVKNVASSFQIHMKPSYTRAIIDMVKHYKWKVLYYVYDSNEGL
QRFEEVYSTLHRDPTLNISVVPVKLEEVDYSHEILRSLDVMYYIGLKTFTIDLSSLDAYRSLMRQIAEVGMNREGYFYLF
ACLDFSKLDFTRFLHGGVNVTGFDIVDSNSADVKSFLRKWRSANTNIYPSAGEPLMSESAMSVDALETIVSALDMMLQED
RFIFKKNFRRLKMFNFNGNITTRGIPCSKVTNLDPPPQPWQHGQEILQALKSVMFNGLTGPVSFDEKGYRKDFELLVSTV
GIDRPPQQEPPYLQLRDPKNKGTTANSRILNGDKYEGFILDFAEKIAEELNVNLKFREVSDENYGEEISKGIWNGMVGEL
RNGTADLAIAPLTITLAREKAIDFTKPFMDVGISIMIKKPDIEKPGVFSFMKPFSLSIWMFILLAYTAVSIGLFLVSRFS
PYEWRKILSSAGISYENDFSLINSFWFSTGALMLQGSDECPRSISGRIIGTVWWFFVLIIISTYTANLAAFLTVENMVAP
IESADQLAAQDQIKYGCRKSGSTEKFFEENQVTTYRNMGAYMKNNPSVMVATTREGIERVRNSKGKYALLIESTMNEYEN
SREPCDTLKVGRNLNAEGYGIATPTGSIYRDRLNLAVLMLHEDGTLLRLKRRWWQDKSQCAPEGTKESSGKPSLSLSNVA
GVFYILIGGLVIAVVFGAFQFIVKQLHLEPKYITAERDTSCDRLIRTPSERENGDLTECASTSADTSLKELPPIGFEAFN
NLQNRPKI

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