Gene
| Gene Model ID | pfu_aug2.0_795.1_17831 |
|---|---|
| Locus | scaffold795.1 : 19120 ... 28515 : - |
| To GenomeBrowser | scaffold795.1:19120..28515 |
| Genes list of scaffold | scaffold795.1 |
| Synonym | pfu_aug1.0_18298.1_25715 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_795.1_17831.t1 | 2 | 1 | TSP_1 | 743 | 755 | 1.4e-09 | 37.8 | 2.0 | 15000.0 | -5.5 |
| pfu_aug2.0_795.1_17831.t1 | 2 | 2 | TSP_1 | 762 | 810 | 1.4e-09 | 37.8 | 1.9e-13 | 1.4e-09 | 37.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_795.1_17831.t1 | gi|657741131|ref|XP_008305640.1| | PREDICTED: LOW QUALITY PROTEIN: SCO-spondin [Cynoglossus semilaevis] | 4.0e-07 |
| pfu_aug2.0_795.1_17831.t1 | gi|734609807|ref|XP_010732227.1| | PREDICTED: brain-specific angiogenesis inhibitor 1 [Larimichthys crocea] | 3.0e-06 |
| pfu_aug2.0_795.1_17831.t1 | gi|554876497|ref|XP_005948124.1| | PREDICTED: SCO-spondin-like [Haplochromis burtoni] | 5.0e-06 |
| pfu_aug2.0_795.1_17831.t1 | gi|742234449|ref|XP_010902095.1| | PREDICTED: brain-specific angiogenesis inhibitor 1-like [Esox lucius] | 5.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_795.1_17831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_795.1_17831.t1 atgtttaacattacgacgagaaagtacggaacggcatttcaaaaaagaaaggagggaatctccaacaacacccggttgca gtaccaacaagaaaactccaaaactctcactgcagaaacacaaagcagacacacacagaaagagacgcaactggtacaag gaacgccaaatcacatagaaacatcaaacacaaatgacataaacgaacgggaccaatgggcaatcggtgccgacttaggc atctgtcacgtcagtagcagacggtatggtgatccggactacccaacctcctacttttctgattacccggaggtctcgaa gaacgtacaattgtggtgtaaaataaccttctcactggaagatgaccatacaaacagacatcatgacgctgagggaccca agaaacacacagatgaatatttaaatggaaacgatcaaccgaagttgatcgacttggctacatgtgcccccggggactcc tggtcaaccagcagtgacactcatcaagtggaatcactgaggtgccttcttgcattcctgatagtggtttcaggactgtc aaatgtcgacacctggaatatctgcgatgtaaataaaccgctaatgagtgaaaatgcaagtctacaggatgttgtcttgg ctatagtaaacgaaaccttgtcccttcctaaaatgggccatattgtccatttaagtgccatagagaaatccacaaaatca aatacagcgtcccctgataaaatgatgtacactctgtacacgtcactcagcaatacagcgagaacaatagaacagaggaa acgacaatttacaatccatttgaagaacatacctggacgctatgcagaagcagtgtccaatatcaattacttccttgaat gcttcaaacttcttggtttaaaaaagaaagcaaataggctcaaacaggcagaccgagtcttacatatcgaacgcggtgtt cacaagtggctatttaggctcaatcatatgcttgtggggcagtatttattcagtggtgaattgcaacaacctgtattatt taatataatagatgatatctcaatgaaaatcggttgttcggatgactacaagagaaccttggacacagtatggcaagaaa tgctacttctgcaatgtcaggggtttctgctttgggcacatgctttacatatccaagggaagaaacttggattcatggtc caatattacaagaagaccctctgcaatcaactgaacaaactgaaagaagacacatgtgaactgacagtgaaaaattcgat caacgttaactgcacaggactatcaaatgtagacacctggaatatctgcgatgtaaataaaccgctaatgagtgaaaatg caagtctacgggatgttgtcttggctatagtaaacgaaaccttgtcccttcctaaaatgggccatattgttcatataagt gccatagagaaatccacaaaatcaagtacagagtcccctgataaaatgatgtacactctgtacacgtcactcagcaatac aacgagaacaatagaacagaggaaacgacaatttacaatccatttgaggaacatacctggacgctatgcagaaacagtgt ccaatatcaattacttccttgaatgcttcaaacttcttggtttaaaaaagaaagcagataggctccaacaggcagaccga gtcttacatatcgaacgcggtgttcacaagtggctatttaggctcaatcatatgcttgtggggcagtatttattcagtgg tgaattgatacaacctgtattatttaatataatagatgatatctcaatgaaaatcggttgttcagatgactacaagagaa ccttggacacagtatggcaagaaatgttaattctgcaatgtcaggggtttctgctttgggcacatgctttacaaatccaa gggaagaaacttggattcatggtccaatattacaagaagaccctttgcaatcaactgaacaaactgaaagaagacacatg tgaactgacagtgaaagattcgatcaatgttaactgcacaggtggattgtacagccatcgtgatggtaaattcttgcccc gctgtaaggcaaactattacctcagcatggagcagattaggccatacataacatgcaaggataggaatgtcgaatgcctg ccgtgtgactgcagtccatatggctccacaagcactgagtgccaagatggtacaggacaatgctactgtagtaaaaacca ctatcaaggcaaaaattgtagggatcgggattgtcattggacctcttggagcacgtggggtaattgcagtaaatcatgtg ggtatggcattaagaaaagagggcgtgttcatgcaatacatcaagagagaaatggtaaagcatgtgaaggggattactat gagacagaaacttgtttcagtgaatgctgtgatacagaattcaattgcaagtcaagtcaaaattgcatccctcaaaattc agtttgtgatgcagttaaagactgttcttacgctgaagatgaaaggaattgttcccgttgttctaccttaagtaacaaaa atcttttgcgcgcgggtggggcattgtattggcaaaatatgaggtgcatgtcttcacaggctgttaattcgtttaagttt ctctatagcattagcaatgctacatctaatctagattttatatattcatgctgtcagttgaagaaggatgtatgtattcc taagtcttatagaaagactctatcgaatcaggaagactacatagggttatacaaatatcctgttcactgtaggagtaatg ggatgcttcaaatgttgtacactagtagagccatgaagtctacacgacggtatatgatttgttgtgagctgaaagaagag tttcgtaaaaaggccatatgttacatcgatcattcaccatacactgaggctgggaagagaatagtgtctagttttccagg acaagggctaaaatgcaagaatggtcattaccttagcatgttaaagattatctatgacaagtcgaagaggaactgggcct tcctttaccgttgttgtaatgtcctttactga |
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Protein
| Protein ID | pfu_aug2.0_795.1_17831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_795.1_17831.t1 MFNITTRKYGTAFQKRKEGISNNTRLQYQQENSKTLTAETQSRHTQKETQLVQGTPNHIETSNTNDINERDQWAIGADLG ICHVSSRRYGDPDYPTSYFSDYPEVSKNVQLWCKITFSLEDDHTNRHHDAEGPKKHTDEYLNGNDQPKLIDLATCAPGDS WSTSSDTHQVESLRCLLAFLIVVSGLSNVDTWNICDVNKPLMSENASLQDVVLAIVNETLSLPKMGHIVHLSAIEKSTKS NTASPDKMMYTLYTSLSNTARTIEQRKRQFTIHLKNIPGRYAEAVSNINYFLECFKLLGLKKKANRLKQADRVLHIERGV HKWLFRLNHMLVGQYLFSGELQQPVLFNIIDDISMKIGCSDDYKRTLDTVWQEMLLLQCQGFLLWAHALHIQGKKLGFMV QYYKKTLCNQLNKLKEDTCELTVKNSINVNCTGLSNVDTWNICDVNKPLMSENASLRDVVLAIVNETLSLPKMGHIVHIS AIEKSTKSSTESPDKMMYTLYTSLSNTTRTIEQRKRQFTIHLRNIPGRYAETVSNINYFLECFKLLGLKKKADRLQQADR VLHIERGVHKWLFRLNHMLVGQYLFSGELIQPVLFNIIDDISMKIGCSDDYKRTLDTVWQEMLILQCQGFLLWAHALQIQ GKKLGFMVQYYKKTLCNQLNKLKEDTCELTVKDSINVNCTGGLYSHRDGKFLPRCKANYYLSMEQIRPYITCKDRNVECL PCDCSPYGSTSTECQDGTGQCYCSKNHYQGKNCRDRDCHWTSWSTWGNCSKSCGYGIKKRGRVHAIHQERNGKACEGDYY ETETCFSECCDTEFNCKSSQNCIPQNSVCDAVKDCSYAEDERNCSRCSTLSNKNLLRAGGALYWQNMRCMSSQAVNSFKF LYSISNATSNLDFIYSCCQLKKDVCIPKSYRKTLSNQEDYIGLYKYPVHCRSNGMLQMLYTSRAMKSTRRYMICCELKEE FRKKAICYIDHSPYTEAGKRIVSSFPGQGLKCKNGHYLSMLKIIYDKSKRNWAFLYRCCNVLY |
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