Gene
| Gene Model ID | pfu_aug2.0_795.1_17834 |
|---|---|
| Locus | scaffold795.1 : 66243 ... 73465 : - |
| To GenomeBrowser | scaffold795.1:66243..73465 |
| Genes list of scaffold | scaffold795.1 |
| Synonym | pfu_aug1.0_3667.1_16149 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_795.1_17834.t1 | 2 | 1 | bZIP_1 | 218 | 228 | 6.8e-09 | 35.5 | 0.043 | 210.0 | 1.9 |
| pfu_aug2.0_795.1_17834.t1 | 1 | 1 | bZIP_2 | 222 | 272 | 1.2e-12 | 47.4 | 5.0e-16 | 2.5e-12 | 46.4 |
| pfu_aug2.0_795.1_17834.t1 | 2 | 2 | bZIP_1 | 225 | 280 | 6.8e-09 | 35.5 | 3.3e-12 | 1.6e-08 | 34.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_795.1_17834.t1 | gi|676471660|ref|XP_009059246.1| | hypothetical protein LOTGIDRAFT_233964 [Lottia gigantea] | 3.0e-22 |
| pfu_aug2.0_795.1_17834.t1 | gi|524894066|ref|XP_005103540.1| | PREDICTED: thyrotroph embryonic factor-like isoform X2 [Aplysia californica] | 1.0e-17 |
| pfu_aug2.0_795.1_17834.t1 | gi|524894064|ref|XP_005103539.1| | PREDICTED: thyrotroph embryonic factor-like isoform X1 [Aplysia californica] | 2.0e-16 |
| pfu_aug2.0_795.1_17834.t1 | gi|163637090|gb|ABY27361.1| | transcription factor [Crassostrea gigas] | 2.0e-12 |
| pfu_aug2.0_795.1_17834.t1 | gi|291238502|ref|XP_002739166.1| | PREDICTED: thyrotroph embryonic factor-like [Saccoglossus kowalevskii] | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_795.1_17834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_795.1_17834.t1 atggctttggacgcgtccccaacacactggaccaactggtggaatggttggagcttccaggaaccggaaatggaaagtcc cggtttggaagtgacatccaccacgacatccaacatttcactacgcatggtccagaagcaaagtggcctatttgacaacg aatatgctggcatcaaagatcttcttgaagccggcctggacgaaaacatggactactctttagatgatatgtcaggggaa aagggaggtaattctatttccctgcaccagccccaggaagccgatattgaagacttcctcgataatatggctacagcttt cccaggggatgacttcctcaacagtttcattgatctgtctaacttttcaacagaggaccagaacgaagcagcaccctcac cgacggccgtctgtgagaaagattctgactctgttgctccggttattcaccttgctgaaactgaggttggcgttaccttg gaaactgcaggccaaaagcgcaagtttgccgatgttgagtatgtgctcgtagacccggtttctgcgggtttggatcacga ctacaccagcaagcgcgctcggattgaaaagcaggaggtgatcgttgacccattcgaccaggagcctagctctttggttc ccaagtctcaacgcactgctgccgaaaaataccgcgacaggcgaattaagaacaacatcgcctcccaaagatctcgcgag attaggaaaatgaagttctctcagatggagactgaagctgataggctcgtaggagaaaaccaacgcctacgcgacaaaat tgaactcttggaaaatctggctaaagaaatgaaagcctctttgattagtaaaatagcagggaataagtaa |
|
Protein
| Protein ID | pfu_aug2.0_795.1_17834.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_795.1_17834.t1 MALDASPTHWTNWWNGWSFQEPEMESPGLEVTSTTTSNISLRMVQKQSGLFDNEYAGIKDLLEAGLDENMDYSLDDMSGE KGGNSISLHQPQEADIEDFLDNMATAFPGDDFLNSFIDLSNFSTEDQNEAAPSPTAVCEKDSDSVAPVIHLAETEVGVTL ETAGQKRKFADVEYVLVDPVSAGLDHDYTSKRARIEKQEVIVDPFDQEPSSLVPKSQRTAAEKYRDRRIKNNIASQRSRE IRKMKFSQMETEADRLVGENQRLRDKIELLENLAKEMKASLISKIAGNK |
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