Gene
| Gene Model ID | pfu_aug2.0_795.1_17840 |
|---|---|
| Locus | scaffold795.1 : 234949 ... 236347 : - |
| To GenomeBrowser | scaffold795.1:234949..236347 |
| Genes list of scaffold | scaffold795.1 |
| Synonym | pfu_aug1.0_3362.1_01435 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_795.1_17840.t1 | 1 | 1 | DUF1768 | 237 | 381 | 4.7e-25 | 88.1 | 2.8e-28 | 8.3e-25 | 87.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_795.1_17840.t1 | gi|561133098|ref|YP_008853983.1| | hypothetical protein [Staphylococcus phage S25-4] | 2.0e-13 |
| pfu_aug2.0_795.1_17840.t1 | gi|66395034|ref|YP_241052.1| | ORF086 [Staphylococcus phage G1] | 1.0e-12 |
| pfu_aug2.0_795.1_17840.t1 | gi|589286675|ref|YP_009006682.1| | hypothetical protein [Staphylococcus phage phiSA012] | 2.0e-12 |
| pfu_aug2.0_795.1_17840.t1 | gi|428783089|ref|YP_007112837.1| | hypothetical protein [Staphylococcus phage JD007] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_795.1_17840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_795.1_17840.t1 atggatgatcgaacaatcaagccgttatacctgaagaacagtgacatacaggtgtgtgaatcgaagcgcatcactgatta tgagttgatggattacctatccaggtgtatcggtgattcgctacactgtttacaattagatcgcaatctttggcgtatat atgttaaagacagagatagtaggaacaaacttttgaatgaaggattggatattcagaatatcgccgtatctttctatgac acaaacccttattcctctggggctactgatgcaaaccaaagaccccttaaactaaggataagtggattaccactctctgt cgacgattccgcaatacatgaactcctaattaaattggaagtgaagctcacaagtaaaattttgtatgaaaaaatcaggc atccggttacaaataagatgacaagcgttctgaacggaaacagatttatgtacattgaacctttacccgagggtcgcagt cttcctcgtgttaacaactgtgctgggcttcgatgtttgctttttcattatggacagccaaaagtggaaagaaaactact ctgtactaattgttggaaaacagaccatactcgttcaaattgcaaaaatgaaccttgttgcaaagtttgtaaagatccag ggcattcgccgggcgatgaaaaatgtcctttttatgaacatcagaaggagataacaccttttagtggcgcaacggatgtt ttatccaatttcttcccttgcagtatggatctttacggcgttcagcataaatcggccgaacatgcgttccaatacacaaa agctgtaagatgtggtgatcttaatgccgctaactccataaaagacgcaaaagatgcactgtctgctaaacgtattggtg ataagataaaacccaatgagcaatggatttctacaaaatccaaagtaatggaggaaatagtcgagaacaaatgtgttcag gttccgatgttcaaagaaaagctacgatccgcaaagcgaaatacactttttgtggaaacatcgcataatgacgaatgggg atctgggctcgatagagagggaacactgtacacaaagaaaaaccattggccgggtaaaaatacgctcggaagtataatcg gaaaagttgccgataaagtgcgcaaacgtaaaaaaagcgaccagtggagtaaacctaaacaaaagcaactctccaaagag acaacaaatcagagggacatagtcaaaatgctcagagacctgcgggctacatcggactctgactctgtgacttccggtca aaatgatgacaccgaatacgattcatcggactga |
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Protein
| Protein ID | pfu_aug2.0_795.1_17840.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_795.1_17840.t1 MDDRTIKPLYLKNSDIQVCESKRITDYELMDYLSRCIGDSLHCLQLDRNLWRIYVKDRDSRNKLLNEGLDIQNIAVSFYD TNPYSSGATDANQRPLKLRISGLPLSVDDSAIHELLIKLEVKLTSKILYEKIRHPVTNKMTSVLNGNRFMYIEPLPEGRS LPRVNNCAGLRCLLFHYGQPKVERKLLCTNCWKTDHTRSNCKNEPCCKVCKDPGHSPGDEKCPFYEHQKEITPFSGATDV LSNFFPCSMDLYGVQHKSAEHAFQYTKAVRCGDLNAANSIKDAKDALSAKRIGDKIKPNEQWISTKSKVMEEIVENKCVQ VPMFKEKLRSAKRNTLFVETSHNDEWGSGLDREGTLYTKKNHWPGKNTLGSIIGKVADKVRKRKKSDQWSKPKQKQLSKE TTNQRDIVKMLRDLRATSDSDSVTSGQNDDTEYDSSD |
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