Gene
| Gene Model ID | pfu_aug2.0_797.1_24411 |
|---|---|
| Locus | scaffold797.1 : 22641 ... 23245 : - |
| To GenomeBrowser | scaffold797.1:22641..23245 |
| Genes list of scaffold | scaffold797.1 |
| Synonym | pfu_aug1.0_218546.1_14226 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cytidine deaminase-like | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_797.1_24411.t1 | 1 | 1 | dCMP_cyt_deam_1 | 9 | 105 | 9.6e-18 | 63.7 | 1.7e-21 | 1.2e-17 | 63.3 |
| pfu_aug2.0_797.1_24411.t1 | 2 | 1 | dCMP_cyt_deam_2 | 10 | 74 | 5.1e-08 | 32.9 | 2.6e-11 | 1.9e-07 | 31.1 |
| pfu_aug2.0_797.1_24411.t1 | 2 | 2 | dCMP_cyt_deam_2 | 125 | 137 | 5.1e-08 | 32.9 | 0.17 | 1300.0 | -0.7 |
Transcript
| Transcript ID | pfu_aug2.0_797.1_24411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24411.t1 atgaatcacggaagagacaagcgtattcaggacttggtgaaggcagcgatagaggtcaaagccaacgtctattgtcctta cagcaactttcgtgttggtgcttcactgctgacagaaaacgatgttattataacaggttgtaacgttgagaacgcatctt atgggctatctgtttgtgcagaacgagtagctattatgtttgctgtgtcacaaggtcataccaagttcaaggctgcggca gtttcatgtgacattaaaggatacttcaaagctccatgtggtgcttgtagacagttttattccgagttcaactttgacct tgacctttacctagtgaagccagacaatacagtaaaatgtgtcaaaatcagagacgttttaccgatggcgtttacaccgc agtcactcgaggaagacaggatctaa |
|
Protein
| Protein ID | pfu_aug2.0_797.1_24411.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24411.t1 MNHGRDKRIQDLVKAAIEVKANVYCPYSNFRVGASLLTENDVIITGCNVENASYGLSVCAERVAIMFAVSQGHTKFKAAA VSCDIKGYFKAPCGACRQFYSEFNFDLDLYLVKPDNTVKCVKIRDVLPMAFTPQSLEEDRI |
|