Gene
| Gene Model ID | pfu_aug2.0_797.1_24412 |
|---|---|
| Locus | scaffold797.1 : 31046 ... 32814 : + |
| To GenomeBrowser | scaffold797.1:31046..32814 |
| Genes list of scaffold | scaffold797.1 |
| Synonym | pfu_aug1.0_3031.1_44550 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| frizzled- partial | GO:0001553 GO:0003008 GO:0006355 GO:0009966 GO:0010604 GO:0016021 GO:0016055 GO:0030154 GO:0031325 GO:0031589 GO:0042813 GO:0044093 GO:0044464 GO:0046983 GO:0048514 GO:0061299 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_797.1_24412.t1 | 2 | 1 | Fz | 12 | 126 | 3.5e-33 | 114.4 | 4.7e-37 | 3.5e-33 | 114.4 |
| pfu_aug2.0_797.1_24412.t1 | 2 | 2 | Fz | 165 | 173 | 3.5e-33 | 114.4 | 1.8 | 14000.0 | -3.6 |
| pfu_aug2.0_797.1_24412.t1 | 1 | 1 | Frizzled | 194 | 498 | 0.0 | 426.4 | 0.0 | 0.0 | 422.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_797.1_24412.t1 | gi|676443587|ref|XP_009050162.1| | hypothetical protein LOTGIDRAFT_201339 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_797.1_24412.t1 | gi|260834485|ref|XP_002612241.1| | hypothetical protein BRAFLDRAFT_269437 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_797.1_24412.t1 | gi|291220968|ref|XP_002730495.1| | PREDICTED: frizzled-4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_797.1_24412.t1 | gi|512850112|ref|XP_004886965.1| | 0.0 | |
| pfu_aug2.0_797.1_24412.t1 | gi|731237067|ref|XP_010632085.1| | PREDICTED: frizzled-4, partial [Fukomys damarensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_797.1_24412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24412.t1 atgcccgcgcacagtaccgaagtggtcagacaatgtgatcccatcaaaatcgaaatgtgcaaaggacttggttataataa cacaggtatgccgaatctggtaggtcacatggttcaacaagacgctgaattacaattacatactttcatgccgcttattc aatacggctgctcaaaacaattgaaatttttcttgtgttctgtctatgttcctatgtgtacagagaaagtcgtagaccca attggtccgtgtagacctatgtgtctaagtgttcagcgacgctgtcaacccgtactacacgagtttggctacccatggcc actggctttaaactgttcgaaatttccacccaaaaatgatcagaaccacatgtgtatggatggtcccgggggagatgacg gtcctgacaccccgaagcctccaccccgtccgtgggacaataccaaacatcgtccaagtaaacctgaccaaagtcacgac tcctcgcaagaaagctgcgacaagttccgtcactctcatatgtacatctacatcaatagaactgaacgttgtgctcttaa atgttccgaaaatgatgcttttaccgccgaggacaaatattttgctgacatttggatgtccatttgggctgcattatgct tcgtttcgactcttttcacagtattaacattcgtcatcgattctcagcgatttagataccccgagaggcccatcattttt ctatccatgtgttttaccatctatagtattgcttttatcgtccggctgatcgctggcagggactctatcgcgtgcgacat tgacagtcccagtggaaaatccattttaattcaagagggactggaaaatactgactgtgccattgtgttcttgttgcttt actatttcggcacagctagtgctctatggtgggtcatcttgacgataacatggttcctttctgctggactgaagtggggc cacgaagcaattcaagttcacagtagttactttcatttggccgcatgggccttgccggccattcagaccattgtaatatt ggtcatgagagacgtcgatgctgacgaactaacaggaatctgttacgttggcaaccaaaacactcaaacactcttgggct ttgcaatagcccctcttctagtctacctctgcgttggaatttccttcctatccgctggtttcttagctctgttccgaatc cgtaaaaagataaaggaggatggagtgaaaacagacaaattagaagtattaatggttcgaattggaatattttccgttct ttatactgtaccagccacttgtgtgattggatgtttattttacgaatatgccaatagagactcgtggtatatgaaagacg tcgaagcatcgtcgccaaaaattgaaattttcatgttaaaagtgtttatgtcacttgtggttggcataactagtggtatg tggatttggtccacaaaaactgtgaattcctggcgaaactttgctgggaaattggcttttaaaaagcaagaacgaaaagg aatagaatacaatagtgttcagtttcaccactatcaaccaattccaatcaagcaagtgaatagggctatacgggctgaga aatccaaaccaaaaagaacgaaatatgacagtgaaacaatcgtctaa |
|
Protein
| Protein ID | pfu_aug2.0_797.1_24412.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24412.t1 MPAHSTEVVRQCDPIKIEMCKGLGYNNTGMPNLVGHMVQQDAELQLHTFMPLIQYGCSKQLKFFLCSVYVPMCTEKVVDP IGPCRPMCLSVQRRCQPVLHEFGYPWPLALNCSKFPPKNDQNHMCMDGPGGDDGPDTPKPPPRPWDNTKHRPSKPDQSHD SSQESCDKFRHSHMYIYINRTERCALKCSENDAFTAEDKYFADIWMSIWAALCFVSTLFTVLTFVIDSQRFRYPERPIIF LSMCFTIYSIAFIVRLIAGRDSIACDIDSPSGKSILIQEGLENTDCAIVFLLLYYFGTASALWWVILTITWFLSAGLKWG HEAIQVHSSYFHLAAWALPAIQTIVILVMRDVDADELTGICYVGNQNTQTLLGFAIAPLLVYLCVGISFLSAGFLALFRI RKKIKEDGVKTDKLEVLMVRIGIFSVLYTVPATCVIGCLFYEYANRDSWYMKDVEASSPKIEIFMLKVFMSLVVGITSGM WIWSTKTVNSWRNFAGKLAFKKQERKGIEYNSVQFHHYQPIPIKQVNRAIRAEKSKPKRTKYDSETIV |
|