Gene
| Gene Model ID | pfu_aug2.0_797.1_24413 |
|---|---|
| Locus | scaffold797.1 : 46646 ... 136694 : + |
| To GenomeBrowser | scaffold797.1:46646..136694 |
| Genes list of scaffold | scaffold797.1 |
| Synonym | pfu_aug1.0_6982.1_60169 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_797.1_24413.t1 | 1 | 1 | Tim17 | 214 | 305 | 5.3e-09 | 36.1 | 1.7e-12 | 1.3e-08 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_797.1_24413.t1 | gi|742154953|ref|XP_010845511.1| | PREDICTED: transmembrane protein 135, partial [Bison bison bison] | 0.0 |
| pfu_aug2.0_797.1_24413.t1 | gi|594092977|ref|XP_006069820.1| | PREDICTED: transmembrane protein 135 isoform X1 [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_797.1_24413.t1 | gi|78369414|ref|NP_001030425.1| | transmembrane protein 135 [Bos taurus] | 0.0 |
| pfu_aug2.0_797.1_24413.t1 | gi|548526657|ref|XP_005699489.1| | PREDICTED: transmembrane protein 135 isoform X1 [Capra hircus] | 0.0 |
| pfu_aug2.0_797.1_24413.t1 | gi|426251469|ref|XP_004019444.1| | PREDICTED: transmembrane protein 135 [Ovis aries] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_797.1_24413.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24413.t1 atgacatttttgttagactggggcgggcttagtcttgttagttttcgatgggaggtggcaggattggtgaaaagaagaga ttcaaaatacttcaagaagaagctacttctagagatcctacagtcatgtttgttcctcacaaccaacggcactttattca tttccttcttctgtctttggagaaaaataacaggattttactttttaccgagcacatttatatgtggaatcccggcatgc gcgttgtctattagcttagagcgtggagacaggaggggtctgcttgcaatatatatggcaaatgtggccacggagacatt ctacagaatggcgttgtcaaggggctgggtaacccccgtcagacacggagaggttctactgtttagcatcgcttctgcca tctacttatacttgttcaggaaaaacagtcttccaagtcagacttcccagttattcagatttctggtggggagggatgaa cttccagtgtcagtgttagcagaggaaggagagtcaacaaagaggaaacaaacctctggggcggggcttagtcagatagc tactcatccattggtgcagaaagtcaacaggagtttacaggccacgcccaaacatcccttgtgtcaacatagaaatggtt gtttatattatgcattaaagggttttacaaagctgtttggtattggttttgtggttcaaggtggcgttaagttgatcagc tctttacccagaatattcaagcagccttcatctctacttcaagctctgaaacatagagacaacttcaaactgggtgcttt tctaggatgcttctcagcaattttcaggctagttaactgtttactacgatgggttaggaacaaagatgatgagcttcatg gaatgttagcgggtttcctagcaggatggtccatgctatggttcaaaagtacaacaatagcgttatatactgcctataag ttagctgagattctatactttaagggaatatccaaagggatagtgccatatatacgatatgcagacatcatcatatactc catatctacagcttatgtgttccatatagcggtgctagaacctcactgtttacgacctgcttattggaaattcctggtca aggttacaggtgataggttttcaaagatgaacagaaagctattagagcctgtcagaccagatgcagccaagatgttcccg gatttctggccagattacgatatgagatacactagccttgcacgagagtcttacttcggaaacagatga |
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Protein
| Protein ID | pfu_aug2.0_797.1_24413.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24413.t1 MTFLLDWGGLSLVSFRWEVAGLVKRRDSKYFKKKLLLEILQSCLFLTTNGTLFISFFCLWRKITGFYFLPSTFICGIPAC ALSISLERGDRRGLLAIYMANVATETFYRMALSRGWVTPVRHGEVLLFSIASAIYLYLFRKNSLPSQTSQLFRFLVGRDE LPVSVLAEEGESTKRKQTSGAGLSQIATHPLVQKVNRSLQATPKHPLCQHRNGCLYYALKGFTKLFGIGFVVQGGVKLIS SLPRIFKQPSSLLQALKHRDNFKLGAFLGCFSAIFRLVNCLLRWVRNKDDELHGMLAGFLAGWSMLWFKSTTIALYTAYK LAEILYFKGISKGIVPYIRYADIIIYSISTAYVFHIAVLEPHCLRPAYWKFLVKVTGDRFSKMNRKLLEPVRPDAAKMFP DFWPDYDMRYTSLARESYFGNR |
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