Gene
| Gene Model ID | pfu_aug2.0_797.1_24417 |
|---|---|
| Locus | scaffold797.1 : 195190 ... 230124 : - |
| To GenomeBrowser | scaffold797.1:195190..230124 |
| Genes list of scaffold | scaffold797.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fanconi anemia group g protein | GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_797.1_24417.t1 | 4 | 1 | TPR_11 | 93 | 148 | 1.7e-13 | 50.0 | 0.00017 | 0.25 | 11.0 |
| pfu_aug2.0_797.1_24417.t1 | 5 | 1 | TPR_2 | 100 | 121 | 4.5e-09 | 35.5 | 0.14 | 200.0 | 2.2 |
| pfu_aug2.0_797.1_24417.t1 | 4 | 2 | TPR_11 | 185 | 263 | 1.7e-13 | 50.0 | 5.9e-06 | 0.0087 | 15.6 |
| pfu_aug2.0_797.1_24417.t1 | 5 | 2 | TPR_2 | 185 | 214 | 4.5e-09 | 35.5 | 0.00045 | 0.67 | 10.0 |
| pfu_aug2.0_797.1_24417.t1 | 5 | 3 | TPR_2 | 243 | 263 | 4.5e-09 | 35.5 | 0.2 | 300.0 | 1.7 |
| pfu_aug2.0_797.1_24417.t1 | 5 | 4 | TPR_2 | 322 | 337 | 4.5e-09 | 35.5 | 0.1 | 150.0 | 2.6 |
| pfu_aug2.0_797.1_24417.t1 | 4 | 3 | TPR_11 | 324 | 337 | 1.7e-13 | 50.0 | 5.7 | 8500.0 | -3.5 |
| pfu_aug2.0_797.1_24417.t1 | 4 | 4 | TPR_11 | 399 | 453 | 1.7e-13 | 50.0 | 4.9e-07 | 0.00072 | 19.1 |
| pfu_aug2.0_797.1_24417.t1 | 5 | 5 | TPR_2 | 399 | 431 | 4.5e-09 | 35.5 | 0.00015 | 0.23 | 11.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_797.1_24417.t1 | gi|585668173|ref|XP_006817449.1| | PREDICTED: uncharacterized protein LOC102801977 [Saccoglossus kowalevskii] | 1.0e-22 |
| pfu_aug2.0_797.1_24417.t1 | gi|149045718|gb|EDL98718.1| | rCG54946 [Rattus norvegicus] | 4.0e-13 |
| pfu_aug2.0_797.1_24417.t1 | gi|564305190|ref|XP_006225319.1| | PREDICTED: Fanconi anemia group G protein isoform X2 [Rattus norvegicus] | 5.0e-13 |
| pfu_aug2.0_797.1_24417.t1 | gi|564305188|ref|XP_006225318.1| | PREDICTED: Fanconi anemia group G protein isoform X1 [Rattus norvegicus] | 5.0e-13 |
| pfu_aug2.0_797.1_24417.t1 | gi|564305193|ref|XP_006225320.1| | PREDICTED: Fanconi anemia group G protein isoform X3 [Rattus norvegicus] | 5.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_797.1_24417.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24417.t1 atggatattttctgtgatgaaataaactacaccaaggataatccactatgtcctggccatgcagctgctaaactcttccc tgaacacctgaagattcatcaccttagcccggttctccaggacaaactgacgagttttatgaagcataccccagagggta cagagagagatgaagtggtcagtttgttatctgggatactgtgctggacaactgaccccggtcagtgtaggcagtacttg gataaagtcactcaaccatgctggaaacagtatgtttattatgtagatggtaagtgtttgtatacatatcagggaaaacc acattgtgccatacagaagtacagagaatcactgaagcatgacttcagtttcctggtaccattgtatcttatttctactc agtacagaaaacttgggctggtggaggctgaactagaatgtcttaacctcttagtcactgcatcagaagatgaaaaagag actttgacatttaatgacttatccttacttatacaactgatgggaacctcagaggtgctactcatcaccaaacctcaggc actgtatgctatggctgccaggtgtatggaacttcacaagtatgatatagcagctcagcattacctggacctactagcat taatacatggcacccagagaattgatgtctccaattctggtcctgttcacattccttgcatagagaatatttaccaagaa ctgacctattccttactgaagtctggagatttcgagtcctgtcttgctgtgtgtaaacatgttctccgtagtaaatctac agatagctttatggactctcacagccaaaactcctcactatccataatgatgtcacaacccagtacttcacggaagagac taaggtctattgagaggggagataactcaacaatatcaagtacagaatcgtcatatgaccttgacctgtatatgagtgtc tgtaaggcagatgctctgatatttctggggaggatccaggaggctttagaggttgtagatagcattgaagcagcagttta tgaccatgctttactcacagcaaatgaggagatgtttctgcttgatgatgtatgtacacctcctgttaaacgacaaagaa ggagctctgatggagaaagtacatcaaaggcaagggaggggagtggtcagacagacagactggcactattcatagcagac acgtacagacatctgggtgtggcattggtgaatgacaacaaatataaagatgctgttcattgtttcatcatctcacttaa gttgcatcctggaagtcttgattctcattttaactgtacaaagaccctgtgggatatggaatgtcagagagaggctgtca gaggctggtgtaaaacaaggaggttaaataccacagacagctttcacgtagctaacttactacagcaaaagaaatctggt ctaaggaatacagagaaggaagatggagatctgtcgtgtatcatggacaatgtgacggatgacatgctgctgaaaatgga cgtcatatgtctggagttcgtcctcagaaatggcgggaaaattggttga |
|
Protein
| Protein ID | pfu_aug2.0_797.1_24417.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_797.1_24417.t1 MDIFCDEINYTKDNPLCPGHAAAKLFPEHLKIHHLSPVLQDKLTSFMKHTPEGTERDEVVSLLSGILCWTTDPGQCRQYL DKVTQPCWKQYVYYVDGKCLYTYQGKPHCAIQKYRESLKHDFSFLVPLYLISTQYRKLGLVEAELECLNLLVTASEDEKE TLTFNDLSLLIQLMGTSEVLLITKPQALYAMAARCMELHKYDIAAQHYLDLLALIHGTQRIDVSNSGPVHIPCIENIYQE LTYSLLKSGDFESCLAVCKHVLRSKSTDSFMDSHSQNSSLSIMMSQPSTSRKRLRSIERGDNSTISSTESSYDLDLYMSV CKADALIFLGRIQEALEVVDSIEAAVYDHALLTANEEMFLLDDVCTPPVKRQRRSSDGESTSKAREGSGQTDRLALFIAD TYRHLGVALVNDNKYKDAVHCFIISLKLHPGSLDSHFNCTKTLWDMECQREAVRGWCKTRRLNTTDSFHVANLLQQKKSG LRNTEKEDGDLSCIMDNVTDDMLLKMDVICLEFVLRNGGKIG |
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