Gene
| Gene Model ID | pfu_aug2.0_7970.1_02944 |
|---|---|
| Locus | scaffold7970.1 : 6776 ... 12047 : + |
| To GenomeBrowser | scaffold7970.1:6776..12047 |
| Genes list of scaffold | scaffold7970.1 |
| Synonym | pfu_aug1.0_642.1_65555 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| germ cell-less partial | GO:0005515 GO:0005635 GO:0006355 GO:0007283 GO:0016363 GO:0044767 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7970.1_02944.t1 | 2 | 1 | BTB | 74 | 181 | 2.3e-13 | 50.0 | 1.5e-16 | 2.3e-12 | 46.8 |
| pfu_aug2.0_7970.1_02944.t1 | 2 | 2 | BTB | 184 | 212 | 2.3e-13 | 50.0 | 0.02 | 290.0 | 1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7970.1_02944.t1 | gi|564233143|ref|XP_006260940.1| | PREDICTED: germ cell-less protein-like 1, partial [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_7970.1_02944.t1 | gi|530582856|ref|XP_005285269.1| | PREDICTED: germ cell-less protein-like 1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_7970.1_02944.t1 | gi|729730750|ref|XP_010561214.1| | PREDICTED: germ cell-less protein-like 1 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_7970.1_02944.t1 | gi|530582854|ref|XP_005285268.1| | PREDICTED: germ cell-less protein-like 1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_7970.1_02944.t1 | gi|557319591|ref|XP_006032958.1| | PREDICTED: germ cell-less protein-like 1, partial [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7970.1_02944.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7970.1_02944.t1 atggggaataaactaagttctgctattgcggataaatttagcaacaagaaaagagaagacaagagaggagagaaaagaaa aaggagagattctgacagggaagatggagaaggtagagagacacctccaccaagctcatcgaaaggcttagctcctcaca gtgacatacataccccaaaacggaaaaagttgctgtctacaaccaaatacatataccaaaccctgttccttgatggagaa aacagtgatataaagatttatgctttaggccaggaatggaaacttcataaagtctacttgtctcagtctccattttttgc gtgcatgtttaacggatcatggagagaagcgttacaaacagagatagatctggacatacctgatcctgccatagacatca aatctttgagaacagcatttggatcattgtacagagactatgtttttattaaaccaatagatgtagtgggagtatttgca gcagcaagcttattgcagttggaaggactaatacagcagtgcttgacaatgatgagtaacagcatcagtgcagatacagt atgcagttattatgatgccagccttagatatgacatagactctgtgaagatggagtgttataactggttattaaccaacc tactgattgtacctgatgtggagctactcaaacagatcagtatacctttaatgaaaaacttggtatcagcttctgaattg tttgttatgcaagtagaaatggatgtttactcactactgaaaaag |
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Protein
| Protein ID | pfu_aug2.0_7970.1_02944.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7970.1_02944.t1 MGNKLSSAIADKFSNKKREDKRGEKRKRRDSDREDGEGRETPPPSSSKGLAPHSDIHTPKRKKLLSTTKYIYQTLFLDGE NSDIKIYALGQEWKLHKVYLSQSPFFACMFNGSWREALQTEIDLDIPDPAIDIKSLRTAFGSLYRDYVFIKPIDVVGVFA AASLLQLEGLIQQCLTMMSNSISADTVCSYYDASLRYDIDSVKMECYNWLLTNLLIVPDVELLKQISIPLMKNLVSASEL FVMQVEMDVYSLLKK |
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