Gene
| Gene Model ID | pfu_aug2.0_798.1_27787 |
|---|---|
| Locus | scaffold798.1 : 3476 ... 6460 : + |
| To GenomeBrowser | scaffold798.1:3476..6460 |
| Genes list of scaffold | scaffold798.1 |
| Synonym | pfu_aug1.0_32104.1_40858 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_798.1_27787.t1 | 2 | 1 | Gal-3-0_sulfotr | 66 | 114 | 6.9e-24 | 84.2 | 9.9e-09 | 0.00015 | 20.5 |
| pfu_aug2.0_798.1_27787.t1 | 2 | 2 | Gal-3-0_sulfotr | 138 | 314 | 6.9e-24 | 84.2 | 7.8e-22 | 1.2e-17 | 63.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_798.1_27787.t1 | gi|260829951|ref|XP_002609925.1| | hypothetical protein BRAFLDRAFT_85873 [Branchiostoma floridae] | 1.0e-30 |
| pfu_aug2.0_798.1_27787.t1 | gi|260824317|ref|XP_002607114.1| | hypothetical protein BRAFLDRAFT_68092 [Branchiostoma floridae] | 1.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_798.1_27787.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_798.1_27787.t1 atgctattcatgacatctgatgtcaaggatttactcaagaatatttcccttggacgcaaccctttacgtaaccatttacc ggtaacatcaagacagaacccatctccacttcatgatgtcaacgatatacacatggacaactcatttggacgtaaccctt tatccgtgaaatcaggacagttgaagagttttacaaaggagaagaaaagaacccatctttacttactgaagacccataag tgtggtagccaaaccatttcggccttattaggacgatttggatacttgaataacttaacatttgttctgccaccagaact taaatctccgaggatatatttagatagagaggatggttatctaccagagccaaaaggagagaaatacgacattctagttc atcactcgctatcacacaatgtaaaacaattggttcaaatgcctggtaaggataccaatgctgtaatatcatggtattta aagcacacacactattatattagtagacctgacttcgtgtatagacttgtagacaatctgatggcttttgagttcggatt tcctatggaagcaaggaaaaatgatacaataatcgaggagttcttaagaaggattgacggtgagtatgatctgatcattg ttctggaatatctcgatgaatccctacttctgctgaaaaggatgatgatgtggtcgataaaagacataatattccttaaa ccattaaatgaagccgttattgataaagaggatgtaataaattcaatgacggcagatgaccgacaacggcacaaaaaact agaatttgtggattttgccttctataattatttcttgatcaaattacgacaacaaattagaagggaaggtatttcttttc aaaaagaacttgaagactacagatcagcgagagctgctgtttcaagattctgtgaaaatcacaagccagaggaggaacta gaatacacaacgaaaaccttcaaagaacatttcaaagtaaattctcattattgtaatctcatgaatgttacattcggtga tctcaggaaattgattaaacaaagaaagcgaaattcgaccgttttatctttgtag |
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Protein
| Protein ID | pfu_aug2.0_798.1_27787.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_798.1_27787.t1 MLFMTSDVKDLLKNISLGRNPLRNHLPVTSRQNPSPLHDVNDIHMDNSFGRNPLSVKSGQLKSFTKEKKRTHLYLLKTHK CGSQTISALLGRFGYLNNLTFVLPPELKSPRIYLDREDGYLPEPKGEKYDILVHHSLSHNVKQLVQMPGKDTNAVISWYL KHTHYYISRPDFVYRLVDNLMAFEFGFPMEARKNDTIIEEFLRRIDGEYDLIIVLEYLDESLLLLKRMMMWSIKDIIFLK PLNEAVIDKEDVINSMTADDRQRHKKLEFVDFAFYNYFLIKLRQQIRREGISFQKELEDYRSARAAVSRFCENHKPEEEL EYTTKTFKEHFKVNSHYCNLMNVTFGDLRKLIKQRKRNSTVLSL |
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