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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_798.1_27790
Locus scaffold798.1 : 87746 ... 90215 : +
To GenomeBrowser scaffold798.1:87746..90215
Genes list of scaffold scaffold798.1
Synonym pfu_aug1.0_2661.1_58996

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_798.1_27790.t1 6 1 Ank_4 64 112 7.0e-18 64.6 0.0059 11.0 6.6
pfu_aug2.0_798.1_27790.t1 9 1 Ank_3 92 120 3.5e-18 63.8 0.00071 1.3 9.4
pfu_aug2.0_798.1_27790.t1 3 1 Ank_2 97 194 1.2e-32 112.0 7.9e-19 1.5e-15 57.3
pfu_aug2.0_798.1_27790.t1 7 1 Ank 97 120 4.8e-22 76.5 0.14 250.0 1.7
pfu_aug2.0_798.1_27790.t1 5 1 Ank_5 132 170 1.1e-12 47.7 5.4e-06 0.01 16.0
pfu_aug2.0_798.1_27790.t1 6 2 Ank_4 134 185 7.0e-18 64.6 6.8e-09 1.3e-05 25.6
pfu_aug2.0_798.1_27790.t1 7 2 Ank 135 162 4.8e-22 76.5 7.1e-09 1.3e-05 24.7
pfu_aug2.0_798.1_27790.t1 9 2 Ank_3 135 161 3.5e-18 63.8 1.2e-06 0.0022 18.0
pfu_aug2.0_798.1_27790.t1 7 3 Ank 166 197 4.8e-22 76.5 0.00033 0.61 10.0
pfu_aug2.0_798.1_27790.t1 9 3 Ank_3 166 193 3.5e-18 63.8 0.00014 0.26 11.6
pfu_aug2.0_798.1_27790.t1 5 2 Ank_5 177 203 1.1e-12 47.7 0.0071 13.0 6.1
pfu_aug2.0_798.1_27790.t1 6 3 Ank_4 179 204 7.0e-18 64.6 0.00048 0.89 10.1
pfu_aug2.0_798.1_27790.t1 3 2 Ank_2 208 287 1.2e-32 112.0 1.7e-12 3.1e-09 37.0
pfu_aug2.0_798.1_27790.t1 9 4 Ank_3 233 256 3.5e-18 63.8 0.00018 0.34 11.2
pfu_aug2.0_798.1_27790.t1 6 4 Ank_4 233 281 7.0e-18 64.6 1.9e-05 0.035 14.6
pfu_aug2.0_798.1_27790.t1 7 4 Ank 234 257 4.8e-22 76.5 0.00047 0.88 9.5
pfu_aug2.0_798.1_27790.t1 5 3 Ank_5 234 270 1.1e-12 47.7 0.00031 0.57 10.5
pfu_aug2.0_798.1_27790.t1 7 5 Ank 262 286 4.8e-22 76.5 0.073 130.0 2.6
pfu_aug2.0_798.1_27790.t1 9 5 Ank_3 262 287 3.5e-18 63.8 1.9 3600.0 -1.2
pfu_aug2.0_798.1_27790.t1 9 6 Ank_3 435 446 3.5e-18 63.8 4.1 7600.0 -2.2
pfu_aug2.0_798.1_27790.t1 9 7 Ank_3 533 546 3.5e-18 63.8 8.0 15000.0 -3.1
pfu_aug2.0_798.1_27790.t1 7 6 Ank 534 577 4.8e-22 76.5 0.00089 1.6 8.6
pfu_aug2.0_798.1_27790.t1 3 3 Ank_2 561 613 1.2e-32 112.0 7.5e-05 0.14 12.5
pfu_aug2.0_798.1_27790.t1 9 8 Ank_3 562 574 3.5e-18 63.8 1.3 2400.0 -0.7
pfu_aug2.0_798.1_27790.t1 5 4 Ank_5 564 585 1.1e-12 47.7 0.05 93.0 3.4
pfu_aug2.0_798.1_27790.t1 6 5 Ank_4 565 586 7.0e-18 64.6 0.0079 15.0 6.2
pfu_aug2.0_798.1_27790.t1 7 7 Ank 581 613 4.8e-22 76.5 0.00069 1.3 8.9
pfu_aug2.0_798.1_27790.t1 9 9 Ank_3 582 612 3.5e-18 63.8 0.2 360.0 1.9
pfu_aug2.0_798.1_27790.t1 5 5 Ank_5 599 622 1.1e-12 47.7 0.041 76.0 3.7
pfu_aug2.0_798.1_27790.t1 6 6 Ank_4 601 622 7.0e-18 64.6 8.0 15000.0 -3.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_798.1_27790.t1 gi|759055088|ref|XP_011336769.1| PREDICTED: protein fem-1 homolog C isoform X1 [Cerapachys biroi] 0.0
pfu_aug2.0_798.1_27790.t1 gi|645039666|ref|XP_008204371.1| PREDICTED: protein fem-1 homolog CG6966 isoform X2 [Nasonia vitripennis] 0.0
pfu_aug2.0_798.1_27790.t1 gi|345483193|ref|XP_003424763.1| PREDICTED: protein fem-1 homolog CG6966 isoform X3 [Nasonia vitripennis] 0.0
pfu_aug2.0_798.1_27790.t1 gi|704590292|ref|XP_010191345.1| PREDICTED: protein fem-1 homolog C [Mesitornis unicolor] 0.0

Transcript
Transcript IDpfu_aug2.0_798.1_27790.t1
Definition-
>pfu_aug2.0_798.1_27790.t1
atggcggaagcacttgaactccagtatcgtatttttacctacaaactccaagaggcgataactgaggacagaaaagaaat
tttctttgctattttgaaggatatatcccctcagnnnnnttctagaatggcggaagcacttgaactccagtatcgtattt
ttacctacaaactccaagaggcgataactgaggacagaaaagaaattttctatgctattctgaaggatatatcccctcaa
tcaaggacaaggatctcatgtcagaaaatccaaggcaggtcctccttctttgtggctgtccaactcggtaggatagattt
tgtgacgtttttcataaatgagtgttcgatcgatataaatgagttatctacctttgaatattccagtggcgaacgtgagg
tgacgccactgtggatagctgtttataacaacgtcttagaaatggtgaaattattggtggaaaacgaagcagacgtcaat
gcaacagtggaaggtgggtccactccagttctggtaggttgtcagacagatgcgatcgaaattgtagaatatctggctga
aaatggcgccgattttgatttaccagacgacaatggaataacctgtttgcgtgagtcgttggacaatgaggaattgtgta
aattcgtcgtcacgaaagtagctgataaaaattaccatcatcctcgacaatttcccatcatacattgtgctattaatctt
aaacaggaatctgtcgtgaagatccttatagaagcaggttgtaatgcgcacgacatcgactttgacggaaatgacgcatt
gaagtttgcagccatccagcctcactctgaaattgtggaatgtattgtatcaagtggatgttttgagaaagcccacgtca
ttgacagctatgaacttttgagtggatccctttttgataaagacaaaacagaggaaggactgtcttacatgagaaaagct
atgaaactgaggttcgaggatccggaaaatcctattctaaaaagggaaccggaacgtgctttggtgttcaacggaattga
agaacccaaaaccatggaagatattgagaaaatgagcaaatatggcgacgatttgagagtgcagtctttattggtacgag
agagggtgctgggaccagagcatcccgatacgctgtacaaagtattaacgtacggaatgatgctgtcttatgacaaggac
tacgcaagcgcactcaccatcctaggttatacctatgaagtcttcttgaagaagaacggcccgctccatgacatggtcgt
gtattccatgtctcaacgcatacggcttctctatgaaatcgttaaggaatatctgtcggacgattttccatgcccgactg
aagaaattttgaaagcgtttgatcaacttgttgaaatgatcaaaaacttttataaactgaaaatggaggacgaaaatgtg
ttggtcaaaaacaagaaaacctacaacacggtcctgaacatgaccttggaagtgctgtatctgatcggccatcttaaact
gaattatgacgaagacgagatgttcggcaaatctatgaataaactgaatcaaatatcaccccgaaatttattcaaacaat
ctttactccacatcgcctacatcaccgatgctaaaaatactcgagctgtaaaactccccggaagacaaaactggcatcca
tatttgacggaagttttcttacaaaacggaagtgacgtcaatgaccgtgatgtatttaaggatactccgctacagtctta
tttgaaaaacaatgggatttctcctgttagtcggacagtcgtatcgtcccttctgcgtcatggggctcatatagacagct
tcaacgtccatggcgactccgccttatcaatgatgcgaaaccaaggatactccatctgtgagattgattatatgaccttg
aaatgtttggctgcgcgcgcaattgtcgcttataacattcaagtacccggctatataccggatgacgtgtatgatttcat
caatgtacgcatcaacgttaaagattgcccacctgttattggggacgaagatacgagcattcaagagtga

Protein
Protein IDpfu_aug2.0_798.1_27790.t1
Definition-
>pfu_aug2.0_798.1_27790.t1
MAEALELQYRIFTYKLQEAITEDRKEIFFAILKDISPQXXSRMAEALELQYRIFTYKLQEAITEDRKEIFYAILKDISPQ
SRTRISCQKIQGRSSFFVAVQLGRIDFVTFFINECSIDINELSTFEYSSGEREVTPLWIAVYNNVLEMVKLLVENEADVN
ATVEGGSTPVLVGCQTDAIEIVEYLAENGADFDLPDDNGITCLRESLDNEELCKFVVTKVADKNYHHPRQFPIIHCAINL
KQESVVKILIEAGCNAHDIDFDGNDALKFAAIQPHSEIVECIVSSGCFEKAHVIDSYELLSGSLFDKDKTEEGLSYMRKA
MKLRFEDPENPILKREPERALVFNGIEEPKTMEDIEKMSKYGDDLRVQSLLVRERVLGPEHPDTLYKVLTYGMMLSYDKD
YASALTILGYTYEVFLKKNGPLHDMVVYSMSQRIRLLYEIVKEYLSDDFPCPTEEILKAFDQLVEMIKNFYKLKMEDENV
LVKNKKTYNTVLNMTLEVLYLIGHLKLNYDEDEMFGKSMNKLNQISPRNLFKQSLLHIAYITDAKNTRAVKLPGRQNWHP
YLTEVFLQNGSDVNDRDVFKDTPLQSYLKNNGISPVSRTVVSSLLRHGAHIDSFNVHGDSALSMMRNQGYSICEIDYMTL
KCLAARAIVAYNIQVPGYIPDDVYDFINVRINVKDCPPVIGDEDTSIQE

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