Gene
| Gene Model ID | pfu_aug2.0_798.1_27796 |
|---|---|
| Locus | scaffold798.1 : 224681 ... 231120 : - |
| To GenomeBrowser | scaffold798.1:224681..231120 |
| Genes list of scaffold | scaffold798.1 |
| Synonym | pfu_aug1.0_7496.1_31399 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_798.1_27796.t1 | 1 | 1 | PIG-F | 32 | 214 | 2.20004e-43 | 148.4 | 0.0 | 2.90069e-43 | 148.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_798.1_27796.t1 | gi|348574674|ref|XP_003473115.1| | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein isoform X1 [Cavia porcellus] | 8.00001e-41 |
| pfu_aug2.0_798.1_27796.t1 | gi|675621781|ref|XP_008938977.1| | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein [Merops nubicus] | 9.99995e-41 |
| pfu_aug2.0_798.1_27796.t1 | gi|697827027|ref|XP_009633966.1| | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein [Egretta garzetta] | 2.0e-40 |
| pfu_aug2.0_798.1_27796.t1 | gi|697042680|ref|XP_009584042.1| | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein [Fulmarus glacialis] | 2.0e-40 |
| pfu_aug2.0_798.1_27796.t1 | gi|723553226|ref|XP_010299025.1| | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein [Balearica regulorum gibbericeps] | 3.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_798.1_27796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_798.1_27796.t1 atgtctgcgcccttgtcgacgcggctccctaacaaaaatgtttacaattttacgctacgatgcctgttctttcaaatctt ggctttgatatgcatttcttttattctgttgacaaatgactcagctgtcaatattatttcaaactgtttactcgcctgtg aattgacgataacgtactttgtgacatcatgtgtcagtttttcagtgtatttgccacaaggaaatacctcaattactacc actacatttgtaaaggtgaagaatggccttaaaggatgtggactgtacattatcagcatcctggtcttccattgtatagc tgtcctgtatggagccccattctttgagtcagtagcagagacgttccattttgccatggtgatgacctcaacagctgtgt taccccccttgtgtgcccttggtattaacttctctagctggatcagggtctttgcacagaacaaaccagagctgggtcca gagtcagtagttcagattgtcaccatactaagtatattaggagcttggctgggtgccttccctataccactcgactggga tagaccttggcagatctggcctatcacatgtgttcttggatccattcttggccatatcgttggtttgtttggtggagcta tgcacctcatgtacagttataggaaattgaagaaatttaaaatcacatga |
|
Protein
| Protein ID | pfu_aug2.0_798.1_27796.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_798.1_27796.t1 MSAPLSTRLPNKNVYNFTLRCLFFQILALICISFILLTNDSAVNIISNCLLACELTITYFVTSCVSFSVYLPQGNTSITT TTFVKVKNGLKGCGLYIISILVFHCIAVLYGAPFFESVAETFHFAMVMTSTAVLPPLCALGINFSSWIRVFAQNKPELGP ESVVQIVTILSILGAWLGAFPIPLDWDRPWQIWPITCVLGSILGHIVGLFGGAMHLMYSYRKLKKFKIT |
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