Gene
| Gene Model ID | pfu_aug2.0_798.1_27797 |
|---|---|
| Locus | scaffold798.1 : 231772 ... 252990 : - |
| To GenomeBrowser | scaffold798.1:231772..252990 |
| Genes list of scaffold | scaffold798.1 |
| Synonym | pfu_aug1.0_5123.1_38070 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_798.1_27797.t1 | 7 | 1 | VCBS | 66 | 126 | 2.8e-12 | 46.7 | 4.1e-06 | 0.0075 | 16.5 |
| pfu_aug2.0_798.1_27797.t1 | 6 | 1 | FG-GAP | 116 | 124 | 4.4e-07 | 29.3 | 0.028 | 52.0 | 3.7 |
| pfu_aug2.0_798.1_27797.t1 | 7 | 2 | VCBS | 189 | 212 | 2.8e-12 | 46.7 | 0.0026 | 4.9 | 7.5 |
| pfu_aug2.0_798.1_27797.t1 | 6 | 2 | FG-GAP | 199 | 211 | 4.4e-07 | 29.3 | 0.0034 | 6.3 | 6.6 |
| pfu_aug2.0_798.1_27797.t1 | 7 | 3 | VCBS | 258 | 273 | 2.8e-12 | 46.7 | 0.11 | 210.0 | 2.3 |
| pfu_aug2.0_798.1_27797.t1 | 6 | 3 | FG-GAP | 264 | 275 | 4.4e-07 | 29.3 | 0.045 | 84.0 | 3.0 |
| pfu_aug2.0_798.1_27797.t1 | 7 | 4 | VCBS | 359 | 408 | 2.8e-12 | 46.7 | 4.9e-05 | 0.091 | 13.1 |
| pfu_aug2.0_798.1_27797.t1 | 6 | 4 | FG-GAP | 360 | 376 | 4.4e-07 | 29.3 | 0.056 | 100.0 | 2.7 |
| pfu_aug2.0_798.1_27797.t1 | 6 | 5 | FG-GAP | 396 | 406 | 4.4e-07 | 29.3 | 0.012 | 22.0 | 4.8 |
| pfu_aug2.0_798.1_27797.t1 | 7 | 5 | VCBS | 401 | 457 | 2.8e-12 | 46.7 | 1.5e-06 | 0.0028 | 17.9 |
| pfu_aug2.0_798.1_27797.t1 | 6 | 6 | FG-GAP | 446 | 462 | 4.4e-07 | 29.3 | 0.39 | 720.0 | 0.0 |
| pfu_aug2.0_798.1_27797.t1 | 7 | 6 | VCBS | 455 | 476 | 2.8e-12 | 46.7 | 0.57 | 1100.0 | 0.1 |
| pfu_aug2.0_798.1_27797.t1 | 7 | 7 | VCBS | 550 | 567 | 2.8e-12 | 46.7 | 2.5 | 4600.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_798.1_27797.t1 | gi|676451918|ref|XP_009052863.1| | hypothetical protein LOTGIDRAFT_159926 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_798.1_27797.t1 | gi|390331642|ref|XP_780158.2| | PREDICTED: protein DEFECTIVE IN EXINE FORMATION 1 isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_798.1_27797.t1 | gi|743790358|ref|XP_010923143.1| | PREDICTED: uncharacterized protein LOC105046288 [Elaeis guineensis] | 0.0 |
| pfu_aug2.0_798.1_27797.t1 | gi|590628717|ref|XP_007026794.1| | Defective in exine formation protein (DEX1) isoform 1 [Theobroma cacao] | 0.0 |
| pfu_aug2.0_798.1_27797.t1 | gi|672124136|ref|XP_008785442.1| | PREDICTED: uncharacterized protein LOC103704071 isoform X2 [Phoenix dactylifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_798.1_27797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_798.1_27797.t1 atgtttagatttgtttattttgtcgtattcctcctgtattatcaattaacatatacttttgccgaggaagaacatcttgc ctcaaaaatcagagcagagcgagtcgaaagaatcagatgtggctactccttaagaacaatatggacgacagagctggctc attctccgtttgcagcggcacctctgattggctatgtggatgaagatgacagtttggacgtagtggccgcgccctttagt gagagtctggcattagtcatgggagagacaggaaaagtgtcggcccaaaaggcgtggccagccaggaatctggacaactc tgttcatgccagtcctatactttttgatataaatggagatggtacgttagaggtgatgttttctatgacgtctggagaac tactattctatacgtcaaacggcactcagatcaagtccaaaaaatatcatattccacccctgtacatattgaggtcgtgg cacaaacatgaggtcatcgtctcttacaaggatgttgacaaatacgccacgttcagcaaagacaaggcccaacagggtac agattacataccagtggatccccacatcatggccacaccttctctagctgacattaacaacgatggggtgacggaggaac ttgttatacctgtgtcatatttttatgaggaagatgactatcgactgagacatgacgagactctaccagatgagggtcag agtcatctgaaaggtcagggttccatactgggtacagattacataccagtggatccccacatcatggccacaccttctct agctgacattaacaacgattgggtgacggaggaacttgttatacctgtgtcatatttttatgaggaagatgactatcgaa taggggatcgtttggagtcattaggtttatcaaacataacggacctcgagaggtacctggcagcaggagttgtcgttctt aatttaacggcacgggaaatcttatgggcaaaagtccttgacattacaaaggtgagtgctagcttcccagcctataactt atttccagtgactgtgatagatctagatgctacaaatggagaattagaaatcatcgttggtacatccgctggcactctgt atgtgtttgatcaccatggcaacctcagagatggatggccagataatggcaacaccatccatggacagattaccgcagct gatctaacaggggatggtagtgtacagcttatctccatggatacggacggtaatgttgtatgctataacaaagatggaag ccgattttgggaagcgaagatttcggattcaagctctgcagggagtcgactatttgacatgaacaaagacacggcccttg atgttctcattgtaaccaatgatggaacttgtagttttacgtcacagtatgacatcactggagcacagagcacggggaat catgacgtcatacataaaaagtgcgctaaagcttgtaacgtgcaaatttacgtaggaatacatttccaagtatgtcaagt aatatcagctgatgacggaactctacatcttatatccacagatctcaaatgtaggtcatatgttccaataggagaaacct cattggtccaggtcctgtcacatgacctagtgactcactcaaagggattggagttgctagtggcaaccaacgatggaact cttctgtgtttgggaacaggaagtgatttagaggaaggagaagatgagagtgaggaaaaatcaaaggaaatctccattgc gtctctaacatcagaaaccaaatcagtcaatgacttttcatacgatgtcaacaagatgggtgtgtatgtatcacacctca caaggattatgacagaggtgacaggcgatagttttgatgtagaatttgacataatagatccgctgcatggtaggagatcg gcacagcatacatatgatgtaaagatatattttggacgacatctccttggtagatcatcattcacagcgcctggtctgaa gaagatgaccgtccctacgtgggaacttccagcgtttggtcatgtgacagtcttaatgaccaatcatctgggtcaagtct tccaggatgtctttcacttgagtgcttag |
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Protein
| Protein ID | pfu_aug2.0_798.1_27797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_798.1_27797.t1 MFRFVYFVVFLLYYQLTYTFAEEEHLASKIRAERVERIRCGYSLRTIWTTELAHSPFAAAPLIGYVDEDDSLDVVAAPFS ESLALVMGETGKVSAQKAWPARNLDNSVHASPILFDINGDGTLEVMFSMTSGELLFYTSNGTQIKSKKYHIPPLYILRSW HKHEVIVSYKDVDKYATFSKDKAQQGTDYIPVDPHIMATPSLADINNDGVTEELVIPVSYFYEEDDYRLRHDETLPDEGQ SHLKGQGSILGTDYIPVDPHIMATPSLADINNDWVTEELVIPVSYFYEEDDYRIGDRLESLGLSNITDLERYLAAGVVVL NLTAREILWAKVLDITKVSASFPAYNLFPVTVIDLDATNGELEIIVGTSAGTLYVFDHHGNLRDGWPDNGNTIHGQITAA DLTGDGSVQLISMDTDGNVVCYNKDGSRFWEAKISDSSSAGSRLFDMNKDTALDVLIVTNDGTCSFTSQYDITGAQSTGN HDVIHKKCAKACNVQIYVGIHFQVCQVISADDGTLHLISTDLKCRSYVPIGETSLVQVLSHDLVTHSKGLELLVATNDGT LLCLGTGSDLEEGEDESEEKSKEISIASLTSETKSVNDFSYDVNKMGVYVSHLTRIMTEVTGDSFDVEFDIIDPLHGRRS AQHTYDVKIYFGRHLLGRSSFTAPGLKKMTVPTWELPAFGHVTVLMTNHLGQVFQDVFHLSA |
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