Gene
| Gene Model ID | pfu_aug2.0_799.1_31170 |
|---|---|
| Locus | scaffold799.1 : 76016 ... 84622 : + |
| To GenomeBrowser | scaffold799.1:76016..84622 |
| Genes list of scaffold | scaffold799.1 |
| Synonym | pfu_aug1.0_12177.1_10419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_799.1_31170.t1 | 3 | 1 | PIF1 | 1 | 86 | 2.3e-13 | 49.8 | 5.7e-14 | 2.1e-10 | 40.0 |
| pfu_aug2.0_799.1_31170.t1 | 3 | 2 | PIF1 | 113 | 144 | 2.3e-13 | 49.8 | 0.00051 | 1.9 | 7.3 |
| pfu_aug2.0_799.1_31170.t1 | 3 | 3 | PIF1 | 497 | 566 | 2.3e-13 | 49.8 | 0.34 | 1300.0 | -2.0 |
| pfu_aug2.0_799.1_31170.t1 | 1 | 1 | PHD | 624 | 668 | 2.4e-10 | 39.9 | 2.3e-13 | 8.5e-10 | 38.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_799.1_31170.t1 | gi|195114486|ref|XP_002001798.1| | GI17040 [Drosophila mojavensis] | 2.0e-24 |
| pfu_aug2.0_799.1_31170.t1 | gi|595949649|ref|XP_007216310.1| | hypothetical protein PRUPE_ppa019701mg [Prunus persica] | 2.0e-24 |
| pfu_aug2.0_799.1_31170.t1 | gi|195035325|ref|XP_001989128.1| | GH11550 [Drosophila grimshawi] | 2.0e-24 |
| pfu_aug2.0_799.1_31170.t1 | gi|731368133|ref|XP_010695976.1| | PREDICTED: ATP-dependent DNA helicase pfh1-like [Beta vulgaris subsp. vulgaris] | 7.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_799.1_31170.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31170.t1 atgctaagttgcaagctcctccaccagattgagcatatatttcgaagaataagacgagtggaaaagccatttggtggcgt acaggttgttttggctggcgattttttacaacttcccccagttccaacacctgagtatggagacgatgggcaaagcatca cagaaagtatcctgttgcagtatttccactgtgagcaacttagtgagatatttcgccagtctgagccagatctgatccaa gcaattcatgaaatagcaagagggaatctgagtaaggaatcagaaaatcttatcctgcgtttgaaaagaacattgcctcc tggtgaaactccaatgaagcttatgtcacgcagagagaatgtcgacatatggaatggaaaatgtctcacagaaatggacg gtgaggaaaaggtgtacagttgcactgacgagggagaatgctcgggattggatatacccaaacagttacacttaaagatt ggatgtccagtcattttgacatacgatccatatataaagaaagataaagggtgccgaacacagttaccattaaaactagg atttgctgcaacaatccacaagtgccagggcatgtcgcttgaaagagtagatattgactgtagagggatattccagtacg gacaattagtcgtagcagtaagcagagcgactacaaagaaagggttacgtatacaaaatttcaagaaagaatatattcag cgacctccagcgaatatccttcgtttctacgaaaatgtaacaaaagaatatacagacgataatgtatgttgcacagaaag tttttgtaacattgactacgatccagtgagcacgcctttcattgctagtgtaacggaaaacgatacttctgacgaagagg gcgatgaagaggcaatgttggaactcattgacagttattcggataatgttgaggaacatgttgaattaccagcaggagtt gacataatttcagcaatcgagacaataaaacatgcatcaccagccaatcaaattcaggaaaatgaaaatttagccgtaaa ttacctcaaagatcatcctgataatgtaaaacagtttgttagcaaggtgtggtggaaattagttcaatataaaacggatg cattcaaacaagaccaaatagacaacaaagcaataaattcattttatgttaaattcaatgaattgttgtcgagtgatctt tacaaaaaagatgtgacgaagctatatgactgtttatttactacagttaccatggaacagtttaatgtggcttttcagct agttgcttatataagaaaaaaagtaaaaactgaactatcgaacatgccatctgtaacaaccgaatggaaggaactttttg tgcagtgtgatgtaaatgtgcaagcttcatttatacacgagatatttgcagaagtaatagaaaagtatcttcgcatgagc aatgcacagctgaggaaagactatatgacaagtcagcatctgaaaaagtcagaggcaacacgcaaacaaataaaaatgag aactgaaacggccatgaagacagttttcaatatgacaacaatcatgaatgacacgtcgaaccaaaaaattatatctcatc ggagacttcaatcagaagtcatgaaaagtaacaaattcttagtggacaaattcaaaaagacagaactccagacattgtgt gcattctatggtgtaagttacaaatctcaacagacaaaaaatgctttatcagaggccttgattccagtaatcactgctgc agataacatggactctcatacagctactgtgagcagcacctcttgtgaaccttcatcttcaggccatgtgagcggaaata agaggaaaagaacagtaaccgaatatccttgtggtgtgtgcttacatgatgcaagtagcaattccgttggctgcgacaga tgtgacaaatggttccacggtgtctgtgttggagaggatttggatgctttgtccgattcagagtggttttgtccaaagtg tagaaaatag |
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Protein
| Protein ID | pfu_aug2.0_799.1_31170.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31170.t1 MLSCKLLHQIEHIFRRIRRVEKPFGGVQVVLAGDFLQLPPVPTPEYGDDGQSITESILLQYFHCEQLSEIFRQSEPDLIQ AIHEIARGNLSKESENLILRLKRTLPPGETPMKLMSRRENVDIWNGKCLTEMDGEEKVYSCTDEGECSGLDIPKQLHLKI GCPVILTYDPYIKKDKGCRTQLPLKLGFAATIHKCQGMSLERVDIDCRGIFQYGQLVVAVSRATTKKGLRIQNFKKEYIQ RPPANILRFYENVTKEYTDDNVCCTESFCNIDYDPVSTPFIASVTENDTSDEEGDEEAMLELIDSYSDNVEEHVELPAGV DIISAIETIKHASPANQIQENENLAVNYLKDHPDNVKQFVSKVWWKLVQYKTDAFKQDQIDNKAINSFYVKFNELLSSDL YKKDVTKLYDCLFTTVTMEQFNVAFQLVAYIRKKVKTELSNMPSVTTEWKELFVQCDVNVQASFIHEIFAEVIEKYLRMS NAQLRKDYMTSQHLKKSEATRKQIKMRTETAMKTVFNMTTIMNDTSNQKIISHRRLQSEVMKSNKFLVDKFKKTELQTLC AFYGVSYKSQQTKNALSEALIPVITAADNMDSHTATVSSTSCEPSSSGHVSGNKRKRTVTEYPCGVCLHDASSNSVGCDR CDKWFHGVCVGEDLDALSDSEWFCPKCRK |
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