Gene
| Gene Model ID | pfu_aug2.0_799.1_31173 |
|---|---|
| Locus | scaffold799.1 : 112094 ... 116085 : - |
| To GenomeBrowser | scaffold799.1:112094..116085 |
| Genes list of scaffold | scaffold799.1 |
| Synonym | pfu_aug1.0_1235.1_07846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_799.1_31173.t1 | 3 | 1 | Ank_2 | 69 | 107 | 8.8e-16 | 58.0 | 0.0065 | 16.0 | 5.9 |
| pfu_aug2.0_799.1_31173.t1 | 3 | 2 | Ank_2 | 70 | 166 | 8.8e-16 | 58.0 | 1.7e-11 | 4.2e-08 | 33.4 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 1 | Ank | 70 | 82 | 4.8e-11 | 41.8 | 0.91 | 2200.0 | -1.3 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 1 | Ank_5 | 70 | 103 | 1.4e-08 | 34.6 | 0.02 | 51.0 | 4.3 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 1 | Ank_3 | 70 | 86 | 9.8e-06 | 25.3 | 0.76 | 1900.0 | -0.4 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 2 | Ank_3 | 98 | 127 | 9.8e-06 | 25.3 | 0.18 | 440.0 | 1.6 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 2 | Ank | 109 | 127 | 4.8e-11 | 41.8 | 0.43 | 1100.0 | -0.3 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 2 | Ank_5 | 116 | 130 | 1.4e-08 | 34.6 | 2.4 | 6000.0 | -2.3 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 3 | Ank_5 | 137 | 172 | 1.4e-08 | 34.6 | 1.0e-07 | 0.00025 | 21.1 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 3 | Ank | 141 | 170 | 4.8e-11 | 41.8 | 3.8e-10 | 9.3e-07 | 28.3 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 3 | Ank_3 | 141 | 164 | 9.8e-06 | 25.3 | 6.1e-06 | 0.015 | 15.4 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 4 | Ank_5 | 189 | 203 | 1.4e-08 | 34.6 | 0.72 | 1800.0 | -0.6 |
| pfu_aug2.0_799.1_31173.t1 | 3 | 3 | Ank_2 | 190 | 273 | 8.8e-16 | 58.0 | 7.7e-08 | 0.00019 | 21.7 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 4 | Ank | 190 | 202 | 4.8e-11 | 41.8 | 0.075 | 190.0 | 2.1 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 4 | Ank_3 | 190 | 203 | 9.8e-06 | 25.3 | 1.3 | 3200.0 | -1.1 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 5 | Ank_3 | 221 | 234 | 9.8e-06 | 25.3 | 0.65 | 1600.0 | -0.1 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 5 | Ank | 222 | 235 | 4.8e-11 | 41.8 | 1.2 | 2900.0 | -1.6 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 5 | Ank_5 | 250 | 273 | 1.4e-08 | 34.6 | 0.33 | 810.0 | 0.4 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 6 | Ank | 255 | 273 | 4.8e-11 | 41.8 | 0.0042 | 10.0 | 6.1 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 6 | Ank_3 | 255 | 273 | 9.8e-06 | 25.3 | 0.12 | 290.0 | 2.2 |
| pfu_aug2.0_799.1_31173.t1 | 6 | 6 | Ank_5 | 294 | 314 | 1.4e-08 | 34.6 | 0.43 | 1100.0 | 0.1 |
| pfu_aug2.0_799.1_31173.t1 | 1 | 1 | SOCS_box | 308 | 344 | 4.1e-08 | 32.9 | 4.6e-11 | 1.1e-07 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_799.1_31173.t1 | gi|545854000|ref|XP_005668275.1| | PREDICTED: ankyrin repeat and SOCS box protein 13 isoform X2 [Sus scrofa] | 2.0e-09 |
| pfu_aug2.0_799.1_31173.t1 | gi|466067662|ref|XP_004281734.1| | PREDICTED: ankyrin repeat and SOCS box protein 13 [Orcinus orca] | 2.0e-09 |
| pfu_aug2.0_799.1_31173.t1 | gi|637381389|ref|XP_003230811.2| | PREDICTED: ankyrin repeat and SOCS box protein 13-like [Anolis carolinensis] | 3.0e-09 |
| pfu_aug2.0_799.1_31173.t1 | gi|488593888|ref|XP_004482166.1| | 4.0e-09 | |
| pfu_aug2.0_799.1_31173.t1 | gi|602711292|ref|XP_007465886.1| | PREDICTED: ankyrin repeat and SOCS box protein 13 [Lipotes vexillifer] | 6.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_799.1_31173.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31173.t1 atgcaaagaaagaaagatgatagaagacttgttgcaagacgagcggaacttttggaagaagaagaaaaattgagagaatt aaattgcaaactgacggagttactagatgggaacgatggtaaacaggatagagaaatagaagaacttgtggatcaacatc agcgaatattaaaaggaacggactcaatgaaatttgcctatctcaaagctgtttctttggataacatcaacgtagtcaaa atctttcataaaaataatcttggatttaacctcaaggaacgaatgattgatatcgaaactccactttctcaagctttgca ctttcaatgaaaccatacatcaagcaatgctcaaatacagtgtttgaaagagcttctcaaactaaatggtttaccaaagg acacatttatagggccgtcgacagcccttatggtagcatgtttcaggggctccgttgactgcataaagatgctacttgaa gcaggatgcaaaacggatatcataaatgacctcggacatgattctgcgcacaggtgtttgaactcttacgatcgcaatcc aaggaggtcagcagagtgtctccgcgtattgatacaaaatggatacccgatccagaacaaaagaatcctaaaatggacta taaattctagtaatgtattagcgctatcgcttttatcagatgcaaatattgatattaatgcaaaactgactattcatgcg agtggaaatagagacagaacagaacaacttcctgccataacatatgcgtcgcggaagcacaaagtcgacgttgtgacttt ccttataaaagctggttgcgtccactttcatctcatcggtgagatatcaacatgtgacattcacaaagccgactacagta attgcggcttccaaggcgttgtgagagaattcttaacagcgcccagaacgttgagagatatatgcaggatcaggatcaga aactcgctgggactttttccacgacagaaaattgcacaacttggtctaccgaagaaaatgtccgagtatgtttccggtga taattttctgagaatgaaattatga |
|
Protein
| Protein ID | pfu_aug2.0_799.1_31173.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31173.t1 MQRKKDDRRLVARRAELLEEEEKLRELNCKLTELLDGNDGKQDREIEELVDQHQRILKGTDSMKFAYLKAVSLDNINVVK IFHKNNLGFNLKERMIDIETPLSQALHFQXNHTSSNAQIQCLKELLKLNGLPKDTFIGPSTALMVACFRGSVDCIKMLLE AGCKTDIINDLGHDSAHRCLNSYDRNPRRSAECLRVLIQNGYPIQNKRILKWTINSSNVLALSLLSDANIDINAKLTIHA SGNRDRTEQLPAITYASRKHKVDVVTFLIKAGCVHFHLIGEISTCDIHKADYSNCGFQGVVREFLTAPRTLRDICRIRIR NSLGLFPRQKIAQLGLPKKMSEYVSGDNFLRMKL |
|