Gene
| Gene Model ID | pfu_aug2.0_799.1_31174 |
|---|---|
| Locus | scaffold799.1 : 164391 ... 166985 : - |
| To GenomeBrowser | scaffold799.1:164391..166985 |
| Genes list of scaffold | scaffold799.1 |
| Synonym | pfu_aug1.0_8169.1_31543 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_799.1_31174.t1 | 1 | 1 | MACPF | 165 | 369 | 4.9e-20 | 72.1 | 7.2e-24 | 1.1e-19 | 71.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_799.1_31174.t1 | gi|348557032|ref|XP_003464324.1| | PREDICTED: macrophage-expressed gene 1 protein [Cavia porcellus] | 0.0 |
| pfu_aug2.0_799.1_31174.t1 | gi|533190470|ref|XP_005408116.1| | PREDICTED: macrophage-expressed gene 1 protein [Chinchilla lanigera] | 0.0 |
| pfu_aug2.0_799.1_31174.t1 | gi|589968672|ref|XP_006996825.1| | PREDICTED: macrophage-expressed gene 1 protein-like [Peromyscus maniculatus bairdii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_799.1_31174.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31174.t1 atgaagcttttaccattactcttgcatcttgtatttttcgtttatgctgttgattgttcactatgtcagattggtgatgg acagaataatacactcagtcttgatgtttatcctggaagtggatgggacaacctggtgaacaagaacagaggacgtgtgt ttgatgtgaactactctaaatgtcaaattactgaggatgggaagtacttcgtacctgatgggatatacctgacacctctg aagagcagtgaagtggaagtttactctgacatcatacgcaactggcaaaattatacttctgatattgctgcaagtattaa cgcagatgcaacgattgacgtcgagggactgccgatcaatggtaaattttcattggnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnaataccaaaacattaaactgaatcaaatccaagacgatgcagcaacaatgaaagtcaaagctaggtatac tctttataaggtgacgatgcagccagatcctcctcttgatactaaattcatggaccgagttaaaaagattgcccatcaca ttcagtttgacagaaaacgatcggcaagatacgaggcacaacttctcgttcgtgactttggtacacatgttgtaacctcg gtggatgctggtgccgctatagttaaagttgaccacgtcaaaagaagctccgttgacgaatcatccaataatttagcgat gattgcattggctgcaaggtctgaactttttggagtttttggagatgtaaaaattgatcctcagacggtgacggcttatc aagcagccaaaactaagtctactatcagaacgtacggaggaccaaagttccggccgatgaacttcagcataaatgattgg atcgatggaatcgaagatgatcttgtcgctcttgatcgttctggagatccactgcatttcatgataacacaagaatctat cccggagttacctctcgacgtcgtaagcgaaactgcaaactacgtacggtctgcaatatcctcttattacaaacacaatg catataaaggatgcacagacagagatgcgccaaattttaacttcagagcaaatnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattgatgatggatcctgcaattt taaccttactggaatgacattcggagggcttttccagaactgttctgtaatcggtccttattatggtatctgtgatgagc ttgaaagtaaaaatccacttactggagacttttcttgtccgagtggttactccgtggtgccattgtataatggcgaagta tcaaaaacaacagagcagaaacaatgttccagctttatgatattttgggaacactgcaaatcttcttctgcaacaacttt cgctcagtatcaatcgtactggtgtgcacaagatggaaatgaacagagtaccgatgcatacatgttcggaggtgtatata cagatgtgattgaaaacagtcttacacttcagaaagcttgtccaccatatttccacacaatagccattgcagagaacata aaagtttgcgtgagtggggatttcgaggcagaaaaatatgccgtccccttcagtggtttctacagctgtcaacattcaaa tcctttggcaactggtgctggtgtttcaaacaacaagaagaaagcatgttccgccggatttaattcatatcttgctgctg aagtcgacgagtgtgatataagttactgcatgataggtgcatcttacgcaaacaggaaaattacccctgtacgtaaccct ccgttcttcaggaaaccaagcgaagtaaatagctcaatagaatatttcgttgcaaatgacggtcagtcatggactcgtat atacacagttaacaactcgttcaatggctttaatacaacaaacgcgagcttgatcacagatagtggcgatacgctcgatg tcagcgttttattgaaagaaaggcaaaatgatcttggacttacatctttaccgtcctctgataacattgcttctttggaa agcacggatatggaaactccgaaacgaagagagaagcagggaaatcgaccctctgtctcccaaattgatcatggagaagt tgcactggttgttggagtttcgtcagctataacacttcttgtgattctcattatatcggttctgatacttagcgttaaaa gcaaaaggagcaaaccgttcaagtattatcacatggaaaagggcgagaaagaaaagtgttga |
|
Protein
| Protein ID | pfu_aug2.0_799.1_31174.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31174.t1 MKLLPLLLHLVFFVYAVDCSLCQIGDGQNNTLSLDVYPGSGWDNLVNKNRGRVFDVNYSKCQITEDGKYFVPDGIYLTPL KSSEVEVYSDIIRNWQNYTSDIAASINADATIDVEGLPINGKFSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXYQNIKLNQIQDDAATMKVKARYTLYKVTMQPDPPLDTKFMDRVKKIAHHIQFDRKRSARYEAQLLVRDFGTHVVTS VDAGAAIVKVDHVKRSSVDESSNNLAMIALAARSELFGVFGDVKIDPQTVTAYQAAKTKSTIRTYGGPKFRPMNFSINDW IDGIEDDLVALDRSGDPLHFMITQESIPELPLDVVSETANYVRSAISSYYKHNAYKGCTDRDAPNFNFRANXXXXXXXXX XXXXXXXXXXXXXXXXXXXIDDGSCNFNLTGMTFGGLFQNCSVIGPYYGICDELESKNPLTGDFSCPSGYSVVPLYNGEV SKTTEQKQCSSFMIFWEHCKSSSATTFAQYQSYWCAQDGNEQSTDAYMFGGVYTDVIENSLTLQKACPPYFHTIAIAENI KVCVSGDFEAEKYAVPFSGFYSCQHSNPLATGAGVSNNKKKACSAGFNSYLAAEVDECDISYCMIGASYANRKITPVRNP PFFRKPSEVNSSIEYFVANDGQSWTRIYTVNNSFNGFNTTNASLITDSGDTLDVSVLLKERQNDLGLTSLPSSDNIASLE STDMETPKRREKQGNRPSVSQIDHGEVALVVGVSSAITLLVILIISVLILSVKSKRSKPFKYYHMEKGEKEKC |
|