Gene
| Gene Model ID | pfu_aug2.0_799.1_31175 |
|---|---|
| Locus | scaffold799.1 : 167586 ... 170010 : + |
| To GenomeBrowser | scaffold799.1:167586..170010 |
| Genes list of scaffold | scaffold799.1 |
| Synonym | pfu_aug1.0_8169.1_31542 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_799.1_31175.t1 | 1 | 1 | MACPF | 125 | 337 | 2.7e-23 | 82.7 | 3.3e-27 | 4.8e-23 | 81.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_799.1_31175.t1 | gi|696989732|ref|XP_009562381.1| | PREDICTED: macrophage-expressed gene 1 protein [Cuculus canorus] | 0.0 |
| pfu_aug2.0_799.1_31175.t1 | gi|524997727|ref|XP_005046631.1| | PREDICTED: macrophage-expressed gene 1 protein [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_799.1_31175.t1 | gi|641787886|ref|XP_008175943.1| | PREDICTED: LOW QUALITY PROTEIN: macrophage-expressed gene 1 protein-like [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_799.1_31175.t1 | gi|363734601|ref|XP_003641422.1| | PREDICTED: macrophage-expressed gene 1 protein [Gallus gallus] | 0.0 |
| pfu_aug2.0_799.1_31175.t1 | gi|197102174|ref|NP_001125461.1| | macrophage-expressed gene 1 protein precursor [Pongo abelii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_799.1_31175.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31175.t1 atgttattgcttcttatatatgcagctacttcaattggatgtacatttgggatacctgaaaatgatggacttacctcgtg caagattcaaaatgacaaggtagtgggtcttgacattttacccggaaatggatgggacaatctgctcaacgagaaccgtc gccgtgttgtatattacaattattccacgtgttccgtaacagacgatggtctatatttggttccagataacgtctttgca ataccactcaaatccagcaccgtggaaatctattcggataggtttgatcattggatgaattacactacagatacagcgaa gtctataaatgtcggaggggatgcctctgtgtttggcgtgttccacattggcgggaaattctccgaggaatacgacgatg tcaaatcacatcaaattaatgataatgccttcaccatgcgcgtaggtgctaaatatgtgatgtacacatctactttacaa cctggcatttctctgaacccagtctttagagaaaaagttctagacatagcacatcatatccagtttgaaagacctaaatc cgcgagatacgaaagtcagcttttggttagaaatttcggaacccacgttataaccagtgttgatgctggagcgatgataa acaggattgatagtgttaacagaaccagcgattcttcgtcacaactgacaaagtcggagcaagcacttgccgcaagtttt tccttcttcggtaatggaatagatttcggcaagtcaaattcagtatctgactcaacagtgacagcctatgttcaaagtag gacgcatgctacagttcgatcccatggtggtccggtatataaaccacagaactttagtgttaatgattgggtggaaggaa taaatgacaatcttgtggtggtcgatagaaagggggatccattacattatcttgtgacgggagaactatttcctgaactc ccggtatctactgtggcggaagtcgcaaacacgatagaaagcgctatacgatcatattacgcattcaacactcatccagg gtgtacagacgtccgatctccaaatttcaattatcatgcaaatgtagacgatggatcgtgtgaattacctggatcaaact tatcatttggtggaatattccaaaattgctctttccaaggggatacatcaaatttgtgtttaagccgcactacagttaac ccaaagagtggagcaatgacatgccccgagggttacgatcctgtcaaattgttccaaggaacagtaaattcgacggaaat tgatcataaatgcgatagttttatgattttctggaagaaatgtcacgatgagcctcgtttcggttctgcaacattcagcg catattggtgtgctgcccatgcgcaagaagctccccctgactcgggctatttgtttggaggagtgttcgataatatcaaa ataaacccatttaccggaaaccataactgtcctagttatttctttcctttgtcagtggcagagtctttaaaggtttgcgt tagtgacgactttgagaatgcagagcaatactctgtcccctttggaggaatatttagctgtcaacacggaaatcctctag cgaataagtattactcaccaaccaatttacccaagacatgccctgagtcgtacagtcaacatctagctactatcgaagag gaatgcgaaataaactattgcacgcttataacggcaaattctggtagctctcccatcaagattaaaaccccaccttttgt taaacgaccaacagaacgaaacgatacagagagctacattattacagaaagtgagagaagctggactcgcatttatgaag tcccgaacaattttactggatttaatggtataatgaatggttgggtacttgatgacgggtcgttcctggacatctcatca cttttaagtgccaagactggccagtcctctaatgtacacccaagacaccaaaggctgcatgagaaagatagtgaaaacaa aaataagaagatccagcagataattaaatttccagagccgaaaacagcagatgtaacaaccaagcatgcctctgtgtcta tatcgacgttggaagaaaatgacgatgatacagattattatgtcagacctcttaccagggaggaggtattggttgtggca ggtttatcttctgtcataaccttactaagtgtctcggttgttattcttatcgtaattgtgtatcgtaaatttgccaaaat ataa |
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Protein
| Protein ID | pfu_aug2.0_799.1_31175.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_799.1_31175.t1 MLLLLIYAATSIGCTFGIPENDGLTSCKIQNDKVVGLDILPGNGWDNLLNENRRRVVYYNYSTCSVTDDGLYLVPDNVFA IPLKSSTVEIYSDRFDHWMNYTTDTAKSINVGGDASVFGVFHIGGKFSEEYDDVKSHQINDNAFTMRVGAKYVMYTSTLQ PGISLNPVFREKVLDIAHHIQFERPKSARYESQLLVRNFGTHVITSVDAGAMINRIDSVNRTSDSSSQLTKSEQALAASF SFFGNGIDFGKSNSVSDSTVTAYVQSRTHATVRSHGGPVYKPQNFSVNDWVEGINDNLVVVDRKGDPLHYLVTGELFPEL PVSTVAEVANTIESAIRSYYAFNTHPGCTDVRSPNFNYHANVDDGSCELPGSNLSFGGIFQNCSFQGDTSNLCLSRTTVN PKSGAMTCPEGYDPVKLFQGTVNSTEIDHKCDSFMIFWKKCHDEPRFGSATFSAYWCAAHAQEAPPDSGYLFGGVFDNIK INPFTGNHNCPSYFFPLSVAESLKVCVSDDFENAEQYSVPFGGIFSCQHGNPLANKYYSPTNLPKTCPESYSQHLATIEE ECEINYCTLITANSGSSPIKIKTPPFVKRPTERNDTESYIITESERSWTRIYEVPNNFTGFNGIMNGWVLDDGSFLDISS LLSAKTGQSSNVHPRHQRLHEKDSENKNKKIQQIIKFPEPKTADVTTKHASVSISTLEENDDDTDYYVRPLTREEVLVVA GLSSVITLLSVSVVILIVIVYRKFAKI |
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