Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_799.1_31176
Locus scaffold799.1 : 186776 ... 189431 : +
To GenomeBrowser scaffold799.1:186776..189431
Genes list of scaffold scaffold799.1
Synonym pfu_aug1.0_4505.1_08912

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_799.1_31176.t1 1 1 Mab-21 149 339 1.1e-33 116.6 5.4e-37 2.7e-33 115.3

Transcript
Transcript IDpfu_aug2.0_799.1_31176.t1
Definition-
>pfu_aug2.0_799.1_31176.t1
atggctgaagctaattctaataccggtattgaaatgagtcttatttctaaaggattatatttcaccgtttgcgatgtgat
aggaccagaatgtattgtgaagctaagacaaaagcgatggagcataagagaatcccttggttcctgtagatcagaccctg
aggcgtttatggcaagtggaagtatggctgagggattcaatttcaaaacttcagattttgataccatgtttatcaacaaa
cgctttaaggtactatgtgatgaccttgtgcacatatggaatacaactgatagtgatatggtgcttctcatggaaacgga
caacgtctctcctggattcacattactcagatgtttaaagtataatcttatgctgtttatgtatgtttccattggaaaca
atgtctactatagcagtaaacgtgctagagaatcattttacccaggttccgtgtctactactcacggaccatgtcaaagt
tatgcatattatggatcagaattcgatgtagcgctcaccttggaatgttctagatggccaagacaagctatgtcattcat
ccatagatctctgcatcatgaatggccttgctatgaagtacttacagacatatgtaaagctggttgtctcctggtaccta
taaacagtaaacaacagacatgtagtgaatatagtgatcttgagtggaggatatcgttttcattagcggaaaaaaagttg
attcactcaatgaatcacagacagcttctttgttatggattactcaaaatatttctgaacgaagttttgaaagaaatacc
ggagttaagagaggttttatgttcatactttatgaaaacagctgtattttgggagataatgaaatgtccgtttaattggt
caaaatctctctttctcgtgaagttttggaatgtcttcagtcgtgtaatgaaatgggtttctgtaggacattgtccaaac
ttttttattccagaacataatatgttctatggaaaaatttttggaagaaaacagagagatgtgatgttgagattgcggac
actatatgatgaaggatacttgtgtctactccggtgtccttctctttataaaacattttctttagtgatagattctccat
atgtttgcattcttgcacctgcaaatgacgactttttgcttccacaatgtcggattgatgtcgaaagattaagaactata
atttctgatattaatgtatttcacgataaagatatctatattcccaacctacttaggctactcgataaaactgcctccct
gataccttcatcagatgagcttgcaactgcaataaaattgagagtcaacagcattttgcaaagatttgctatagttttac
attcgttcctcaataattcaaatcgaagccgaacttcaaacaaattaaaatataacttagtgaaatctgtaaaatcaatt
ctgagacatacaaagacatatcattgcttcaatttaatcctcgtagcagaatgctcatataaaaatgcagaatacaacga
aacagtacagatcgtgaatcacataaaacaaacaatgtccggacaaccgtatatgtacgcttggtgcattgactgcgact
ttgtcaaagaatgtaggcaacatggagtagcctttgatttgatactgaagtcatttattatcactaagtataactatata
cctggattatccatggaggagttacatcttgaaagtaaagcaatgattgaaagcaatggacattgcgacattccgatatc
accattagtgttcttgaactttcttcttatactttgttataccaaattgtctgaaacaaacaatagaaaggagatcttga
atgagcttcaagtacttgtttcttctgatgctggttatcatatacattgtgatagtgtatcaatatcatgggagatctta
ggtatatgccagcagctttgtggagaccatagaagtgcttatgagtcatacaatagagccctgagtggtgaattcaacta
ttttaaacaagcaacaaaggctcgaatcgatagtattcttcaaaatagcgcaaataatttatga

Protein
Protein IDpfu_aug2.0_799.1_31176.t1
Definition-
>pfu_aug2.0_799.1_31176.t1
MAEANSNTGIEMSLISKGLYFTVCDVIGPECIVKLRQKRWSIRESLGSCRSDPEAFMASGSMAEGFNFKTSDFDTMFINK
RFKVLCDDLVHIWNTTDSDMVLLMETDNVSPGFTLLRCLKYNLMLFMYVSIGNNVYYSSKRARESFYPGSVSTTHGPCQS
YAYYGSEFDVALTLECSRWPRQAMSFIHRSLHHEWPCYEVLTDICKAGCLLVPINSKQQTCSEYSDLEWRISFSLAEKKL
IHSMNHRQLLCYGLLKIFLNEVLKEIPELREVLCSYFMKTAVFWEIMKCPFNWSKSLFLVKFWNVFSRVMKWVSVGHCPN
FFIPEHNMFYGKIFGRKQRDVMLRLRTLYDEGYLCLLRCPSLYKTFSLVIDSPYVCILAPANDDFLLPQCRIDVERLRTI
ISDINVFHDKDIYIPNLLRLLDKTASLIPSSDELATAIKLRVNSILQRFAIVLHSFLNNSNRSRTSNKLKYNLVKSVKSI
LRHTKTYHCFNLILVAECSYKNAEYNETVQIVNHIKQTMSGQPYMYAWCIDCDFVKECRQHGVAFDLILKSFIITKYNYI
PGLSMEELHLESKAMIESNGHCDIPISPLVFLNFLLILCYTKLSETNNRKEILNELQVLVSSDAGYHIHCDSVSISWEIL
GICQQLCGDHRSAYESYNRALSGEFNYFKQATKARIDSILQNSANNL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495