Gene
| Gene Model ID | pfu_aug2.0_8.1_26621 |
|---|---|
| Locus | scaffold8.1 : 180158 ... 204706 : + |
| To GenomeBrowser | scaffold8.1:180158..204706 |
| Genes list of scaffold | scaffold8.1 |
| Synonym | pfu_aug1.0_12034.1_17810 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8.1_26621.t3 | 1 | 1 | IMPDH | 74 | 528 | 0.0 | 459.1 | 0.0 | 0.0 | 458.7 |
| pfu_aug2.0_8.1_26621.t3 | 2 | 1 | NMO | 77 | 152 | 2.7e-10 | 39.9 | 0.00017 | 0.2 | 10.7 |
| pfu_aug2.0_8.1_26621.t3 | 2 | 1 | CBS | 141 | 187 | 7.0e-12 | 44.9 | 2.5e-06 | 0.0031 | 17.2 |
| pfu_aug2.0_8.1_26621.t3 | 2 | 2 | CBS | 200 | 250 | 7.0e-12 | 44.9 | 1.0e-08 | 1.3e-05 | 24.9 |
| pfu_aug2.0_8.1_26621.t3 | 1 | 1 | FMN_dh | 292 | 412 | 5.8e-10 | 38.5 | 8.7e-13 | 1.1e-09 | 37.6 |
| pfu_aug2.0_8.1_26621.t3 | 2 | 1 | His_biosynth | 292 | 349 | 1.6e-07 | 30.8 | 0.0039 | 4.8 | 6.3 |
| pfu_aug2.0_8.1_26621.t3 | 2 | 2 | NMO | 327 | 421 | 2.7e-10 | 39.9 | 3.5e-10 | 4.3e-07 | 29.4 |
| pfu_aug2.0_8.1_26621.t3 | 2 | 2 | His_biosynth | 356 | 414 | 1.6e-07 | 30.8 | 1.6e-08 | 2.0e-05 | 23.9 |
Transcript
| Transcript ID | pfu_aug2.0_8.1_26621.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26621.t1 atgtcaccaaagcacacggttcgtgatgtgaatgaggccaagaaacattttggtttctcgggtatccctataacggctaa cggtcacatgggagagaagttagttggtcttgttactcagagagatatagacttcctgactcaggaggagtttggtgtac ccctgtcagatgtgatgacaaagtatgaagatttggttattgcacatagtggtgttaccctgaaagatgctaatggaata ttgcaaaaaagtaaaaagggtaaactgcctatagtaaatgatgatggtgaattagtagcactgattgctaggacagacac aaagaaaaacagagagttccccttggcttctaaagatgaaaagaagcagttaatagtgggagcggcaataagtactcatg aagaggataaaaaacgactggagttactacaacaggccggagttgacttcttggtgctggactcttcacaaggcaattct acttaccaaatcaacatgatcaaatacataaagaaaacatatcccgaattacagatcataggaggcaatgttgtgacggc agctcaagccaagaatctcattgatgctggagtagacggcttgagggtaggaatgggcagtggctccatctgtattacac aggaagttatggcagtgggtagaccacagggtacggcagtatataaagtagccgagtacgctagaaggtttggtgtacct gtaattgccgatggaggaatctcatcagtgggtcatgtgatcaaagctctggcactcggagcttcaacggtgatgatggg ctccatgctagctggtacatcagaggctccaggggagtacttctttgctgacggtgtacggttaaagaaatatcgaggta tggggtcactcgatgccatggaaaaacataggagcagtcagagtagatattttagtgagagtgataagataaaggtagcc cagggtgtgtccggttctatagttgacaaaggatccatcaacaagtttgtcccgtaccttatcgctggaattcaacatgg ctgtcaagacataggagcaaggagtctttcaaacctgagatccatgatgtattcaggagaattaaagtttgaaagaagga caccatcagctcaagttgaaggaggagtacataatctacacaatatcctgagaatatag |
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| Transcript ID | pfu_aug2.0_8.1_26621.t2 |
| Definition | - |
>pfu_aug2.0_8.1_26621.t2 atgtcaccaaagcacacggttcgtgatgtgaatgaggccaagaaacattttggtttctcgggtatccctataacggctaa cggtcacatgggagagaagttagttggtcttgttactcagagagatatagacttcctgactcaggaggagtttggtgtac ccctgtcagatgtgatgacaaagtatgaagatttggttattgcacatagtggtgttaccctgaaagatgctaatggaata ttgcaaaaaagtaaaaagggtaaactgcctatagtaaatgatgatggtgaattagtagcactgattgctaggacagacac aaagaaaaacagagagttccccttggcttctaaagatgaaaagaagcagttaatagtgggagcggcaataagtactcatg aagaggataaaaaacgactggagttactacaacaggccggagttgacttcttggtgctggactcttcacaaggcaattct acttaccaaatcaacatgatcaaatacataaagaaaacatatcccgaattacagatcataggaggcaatgttgtgacggc agctcaagccaagaatctcattgatgctggagtagacggcttgagggtaggaatgggcagtggctccatctgtattacac aggaagttatggcagtgggtagaccacagggtacggcagtatataaagtagccgagtacgctagaaggtttggtgtacct gtaattgccgatggaggaatctcatcagtgggtcatgtgatcaaagctctggcactcggagcttcaacggtgatgatggg ctccatgctagctggtacatcagaggctccaggggagtacttctttgctgacggtgtacggttaaagaaatatcgaggta tggggtcactcgatgccatggaaaaacataggagcagtcagagtagatattttagtgagagtgataagataaaggtagcc cagggtgtgtccggttctatagttgacaaaggatccatcaacaagtttgtcccgtaccttatcgctggaattcaacatgg ctgtcaagacataggagcaaggagtctttcaaacctgagatccatgatgtattcaggagaattaaagtttgaaagaagga caccatcagctcaagttgaaggaggagtacataatctacacaattatgagaagaggttatactga |
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| Transcript ID | pfu_aug2.0_8.1_26621.t3 |
| Definition | - |
>pfu_aug2.0_8.1_26621.t3 atgagccacaatacggagcgctttgcacccgtcggaaaacgttacttagaaagccaaggtgatagcagtatggccgacta tctaatcaccggtggtacaggttatgtgccagacgatggacagactggtgctcagctctttgcaaatggggacggaatga cctacaattctgaacaattgaaaaaaaaaacacttttcaaaatacatcattatttcaaggacttgacatctgctttgact aagaagatatcactacgtgcccctctggtgtcctcgcccatggacacggtcacagagtcacagatggctattggtatggc tttatgtggaggagtaggtgttattcatcacaattgtacaccagaatttcaagcaaatgaggtcagaaaggtcaagaaat atgaacaaggatttatccttgaccctgttgtgatgtcaccaaagcacacggttcgtgatgtgaatgaggccaagaaacat tttggtttctcgggtatccctataacggctaacggtcacatgggagagaagttagttggtcttgttactcagagagatat agacttcctgactcaggaggagtttggtgtacccctgtcagatgtgatgacaaagtatgaagatttggttattgcacata gtggtgttaccctgaaagatgctaatggaatattgcaaaaaagtaaaaagggtaaactgcctatagtaaatgatgatggt gaattagtagcactgattgctaggacagacacaaagaaaaacagagagttccccttggcttctaaagatgaaaagaagca gttaatagtgggagcggcaataagtactcatgaagaggataaaaaacgactggagttactacaacaggccggagttgact tcttggtgctggactcttcacaaggcaattctacttaccaaatcaacatgatcaaatacataaagaaaacatatcccgaa ttacagatcataggaggcaatgttgtgacggcagctcaagccaagaatctcattgatgctggagtagacggcttgagggt aggaatgggcagtggctccatctgtattacacaggaagttatggcagtgggtagaccacagggtacggcagtatataaag tagccgagtacgctagaaggtttggtgtacctgtaattgccgatggaggaatctcatcagtgggtcatgtgatcaaagct ctggcactcggagcttcaacggtgatgatgggctccatgctagctggtacatcagaggctccaggggagtacttctttgc tgacggtgtacggttaaagaaatatcgaggtatggggtcactcgatgccatggaaaaacataggagcagtcagagtagat attttagtgagagtgataagataaaggtagcccagggtgtgtccggttctatagttgacaaaggatccatcaacaagttt gtcccgtaccttatcgctggaattcaacatggctgtcaagacataggagcaaggagtctttcaaacctgagatccatgat gtattcaggagaattaaagtttgaaagaaggacaccatcagctcaagttgaaggaggagtacataatctacacaatatcc tgagaatatag |
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Protein
| Protein ID | pfu_aug2.0_8.1_26621.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26621.t1 MSPKHTVRDVNEAKKHFGFSGIPITANGHMGEKLVGLVTQRDIDFLTQEEFGVPLSDVMTKYEDLVIAHSGVTLKDANGI LQKSKKGKLPIVNDDGELVALIARTDTKKNREFPLASKDEKKQLIVGAAISTHEEDKKRLELLQQAGVDFLVLDSSQGNS TYQINMIKYIKKTYPELQIIGGNVVTAAQAKNLIDAGVDGLRVGMGSGSICITQEVMAVGRPQGTAVYKVAEYARRFGVP VIADGGISSVGHVIKALALGASTVMMGSMLAGTSEAPGEYFFADGVRLKKYRGMGSLDAMEKHRSSQSRYFSESDKIKVA QGVSGSIVDKGSINKFVPYLIAGIQHGCQDIGARSLSNLRSMMYSGELKFERRTPSAQVEGGVHNLHNILRI |
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| Protein ID | pfu_aug2.0_8.1_26621.t2 |
| Definition | - |
>pfu_aug2.0_8.1_26621.t2 MSPKHTVRDVNEAKKHFGFSGIPITANGHMGEKLVGLVTQRDIDFLTQEEFGVPLSDVMTKYEDLVIAHSGVTLKDANGI LQKSKKGKLPIVNDDGELVALIARTDTKKNREFPLASKDEKKQLIVGAAISTHEEDKKRLELLQQAGVDFLVLDSSQGNS TYQINMIKYIKKTYPELQIIGGNVVTAAQAKNLIDAGVDGLRVGMGSGSICITQEVMAVGRPQGTAVYKVAEYARRFGVP VIADGGISSVGHVIKALALGASTVMMGSMLAGTSEAPGEYFFADGVRLKKYRGMGSLDAMEKHRSSQSRYFSESDKIKVA QGVSGSIVDKGSINKFVPYLIAGIQHGCQDIGARSLSNLRSMMYSGELKFERRTPSAQVEGGVHNLHNYEKRLY |
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| Protein ID | pfu_aug2.0_8.1_26621.t3 |
| Definition | - |
>pfu_aug2.0_8.1_26621.t3 MSHNTERFAPVGKRYLESQGDSSMADYLITGGTGYVPDDGQTGAQLFANGDGMTYNSEQLKKKTLFKIHHYFKDLTSALT KKISLRAPLVSSPMDTVTESQMAIGMALCGGVGVIHHNCTPEFQANEVRKVKKYEQGFILDPVVMSPKHTVRDVNEAKKH FGFSGIPITANGHMGEKLVGLVTQRDIDFLTQEEFGVPLSDVMTKYEDLVIAHSGVTLKDANGILQKSKKGKLPIVNDDG ELVALIARTDTKKNREFPLASKDEKKQLIVGAAISTHEEDKKRLELLQQAGVDFLVLDSSQGNSTYQINMIKYIKKTYPE LQIIGGNVVTAAQAKNLIDAGVDGLRVGMGSGSICITQEVMAVGRPQGTAVYKVAEYARRFGVPVIADGGISSVGHVIKA LALGASTVMMGSMLAGTSEAPGEYFFADGVRLKKYRGMGSLDAMEKHRSSQSRYFSESDKIKVAQGVSGSIVDKGSINKF VPYLIAGIQHGCQDIGARSLSNLRSMMYSGELKFERRTPSAQVEGGVHNLHNILRI |
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