Gene
| Gene Model ID | pfu_aug2.0_8.1_26624 |
|---|---|
| Locus | scaffold8.1 : 302018 ... 319178 : + |
| To GenomeBrowser | scaffold8.1:302018..319178 |
| Genes list of scaffold | scaffold8.1 |
| Synonym | pfu_aug1.0_12406.1_39328 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8.1_26624.t2 | 2 | 1 | ThiF | 67 | 186 | 0.0 | 180.1 | 1.3e-21 | 4.9e-18 | 65.2 |
| pfu_aug2.0_8.1_26624.t2 | 2 | 2 | ThiF | 462 | 602 | 0.0 | 180.1 | 4.5e-36 | 1.7e-32 | 112.1 |
| pfu_aug2.0_8.1_26624.t2 | 2 | 1 | UBA_e1_thiolCys | 606 | 650 | 2.8e-23 | 81.0 | 1.1e-25 | 4.1e-22 | 77.2 |
| pfu_aug2.0_8.1_26624.t2 | 2 | 2 | UBA_e1_thiolCys | 693 | 709 | 2.8e-23 | 81.0 | 0.044 | 160.0 | 1.7 |
| pfu_aug2.0_8.1_26624.t2 | 3 | 1 | UBACT | 746 | 806 | 3.4e-40 | 135.4 | 5.2e-15 | 1.9e-11 | 43.3 |
| pfu_aug2.0_8.1_26624.t2 | 3 | 2 | UBACT | 844 | 910 | 3.4e-40 | 135.4 | 6.1e-30 | 2.3e-26 | 91.1 |
| pfu_aug2.0_8.1_26624.t2 | 1 | 1 | UBA_e1_C | 917 | 1042 | 0.0 | 175.2 | 0.0 | 0.0 | 173.8 |
| pfu_aug2.0_8.1_26624.t2 | 3 | 3 | UBACT | 1008 | 1018 | 3.4e-40 | 135.4 | 1.2 | 4500.0 | -2.7 |
Transcript
| Transcript ID | pfu_aug2.0_8.1_26624.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26624.t1 atggcacaaaatgggaccactgacattgatgaaagtctttattcaaggcagctgtatgtgctgggaaaagatgccatgaa aaaaatggccaactccaatgttcttatctgtggaatgaaaggacttggtattgaagtggctaaaaatgtagttcttggtg gagtgaagtccgtcaccatacaggatacagagaatgtggcttggaatgacttgtcatctcagttcttccttcgagaagag gaaattggaaaaaacagagctgagatttctttgcctagacttgccgaactgaacaactatgttccagtgtcatctcacac taaatcacttacagaggacttcgtcaaaggatttaaggttgtagtgttaacaaattcatcatttgaagaacagagcaaga ttggagaaatttgccacaaaaacgacatcaaatttattgttgccgagtccagaggattgtttggcaagatattctgtgac tttggagaggcttttgtagtaaatgacgtggacggtgaagagcccggcaataatatgattgctgacataacaaaggaagc agagggagttgtaacttgcctggacgagaccagacacggttatgaagatggtgaccatgtgacgtttagtgaggtacagg gtatgacagaacttaatggctgtcaaccaatcaaaattaaagtccttggtccttacacattcagtataggagatacctca ggatttggaaactatgtcagaggaggaaatgttacgaaagtcaaaatgccaaaaacactcaaatttaaatctttcaaaga agccacagatgccccagaaattctcatgacagattttgccaagtttgatcgacctgggcaactgcacttaggattccagg cactctcagcgtatgaggaaaaacataaacgacttcctgcctgcagatgcaaagctgatgcagatgaatttgtcaaaata gtgaaggaaatcaatggtaattctcctgctaaggtggacgagtttgatgatgaggtattacgtgagttctcctacacatg tcgtggagatatcagcccaatggcctcattcctagggggagtggctgctcaggaggtcatgaagtcttgttcggggaagt ttagccctatataccagtttctgtactttgatgccttggagtgtctaccagaggacaaaggcaccctcacagaggaaagc tgcaaacctaaaaactgtaggtatgatggacagacagcgatatttggacagacttttcagaacactattgggaatctcaa gtactttttggtaggagcaggtgccataggttgtgagatgctgaagatgtgggcgttaatgggtgtggcatgtggggagc agggtaacgtaactgttacagacatggatatcatagagaaatccaacctcaacagacagttcctcttcagaccttgggat gttcagaaaaccaagtcctcaacagctgccaatgctgccaaagtaatgaatcctggtatgaaggtaaaaccacaggagaa cagagtgggacccgacacagagaatatttatgatgatgctttctttgaagcattagacggagtggccaatgccctagata atgttgatgccagaatgtacatggacaggcgatgtgtttactacagaaagcccctgctagagtcagggaccctggggacg aaaggcaacacacaggtggtgattccccaccttacagagtcctattcctcatcacaagatccccctgaaaaatccattcc aatctgtacactcaaaaacttccctaatgctatagaacacaccctacagtgggcccgtgatcagtttgagggtttattct gccagccagcggaggcagcatcacagtacattacagaccccaaattcatggagaggacagtcaaacaacaaggcactcag ccaatagagacactagaagcagtaaagaaggcattaatagacgacaaacctgcagatttccaggcttgtgtcgattttgc ccgtaaattatgggaagagaactataataatactattcagcaattactcttcaatttcccacctgatcaggtaaccagtt caggagcaccattttggtcaggaccaaaaagatgcccacacccactcaaatttgatctgaataatgaggtacatgtggac tttgttgtagccacagctaaccttaaagctgagatgtatggacttaaacaggttagagatcgtgatagtataaagactat gatcaagaaagtcaatgtgccagtattcaaaccaaaatcaggagttaagatagaagtatctgatgccgaaatggaagcta gccggaaccagggttcagtagattcagaccagttagaaaatttacagaaaatgttgccgcctcttgacaaagtgaaaaat ctcaaaattactcctatagactttgaaaaagatgatgatacaaatttccatatggactttatagttgcttgttcaaattt acgtgcagagaattacagtatacctccagcggatcgttcaaagagtaaattaatagcaggaaaaatcattccagccattg ccacaacaactgcgttaatagtaggtcttgtgggtatagagatgatcaaattgattcaaggacacaaaaaattagatccc tacaaaaatggatttgtaaatttagcattgccattctttgcattctccgagcctatatcagctcccaagaataagtacta tgacacagaattttcattatgggacagatttgaagtacaaggagagatgacattaaagcaattcatagattacttcaaga atgagcacaagttagagataactatgctgtctcagggtgtatccatgctctattcattcttcatgccaccagcaaaacgc aaggaaagaatggagctgccgatgtcggaggtggtcaaacgagtatccaaaaagaagattcctagtcatgttaaagctct agtactggaaatttgctgtaatgatgaatctggagaagacgtagaaattccgtacgtcaagtataatctaccgcagtaa |
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| Transcript ID | pfu_aug2.0_8.1_26624.t2 |
| Definition | - |
>pfu_aug2.0_8.1_26624.t2 atgtccagtcgcactgaatctgagagtcctccagccaagaaagcccgtaccgaccttgttgaagtcgacaggataacttc aaactctttagaaacaaattctgcaaccatggcacaaaatgggaccactgacattgatgaaagtctttattcaaggcagc tgtatgtgctgggaaaagatgccatgaaaaaaatggccaactccaatgttcttatctgtggaatgaaaggacttggtatt gaagtggctaaaaatgtagttcttggtggagtgaagtccgtcaccatacaggatacagagaatgtggcttggaatgactt gtcatctcagttcttccttcgagaagaggaaattggaaaaaacagagctgagatttctttgcctagacttgccgaactga acaactatgttccagtgtcatctcacactaaatcacttacagaggacttcgtcaaaggatttaaggttgtagtgttaaca aattcatcatttgaagaacagagcaagattggagaaatttgccacaaaaacgacatcaaatttattgttgccgagtccag aggattgtttggcaagatattctgtgactttggagaggcttttgtagtaaatgacgtggacggtgaagagcccggcaata atatgattgctgacataacaaaggaagcagagggagttgtaacttgcctggacgagaccagacacggttatgaagatggt gaccatgtgacgtttagtgaggtacagggtatgacagaacttaatggctgtcaaccaatcaaaattaaagtccttggtcc ttacacattcagtataggagatacctcaggatttggaaactatgtcagaggaggaaatgttacgaaagtcaaaatgccaa aaacactcaaatttaaatctttcaaagaagccacagatgccccagaaattctcatgacagattttgccaagtttgatcga cctgggcaactgcacttaggattccaggcactctcagcgtatgaggaaaaacataaacgacttcctgcctgcagatgcaa agctgatgcagatgaatttgtcaaaatagtgaaggaaatcaatggtaattctcctgctaaggtggacgagtttgatgatg aggtattacgtgagttctcctacacatgtcgtggagatatcagcccaatggcctcattcctagggggagtggctgctcag gaggtcatgaagtcttgttcggggaagtttagccctatataccagtttctgtactttgatgccttggagtgtctaccaga ggacaaaggcaccctcacagaggaaagctgcaaacctaaaaactgtaggtatgatggacagacagcgatatttggacaga cttttcagaacactattgggaatctcaagtactttttggtaggagcaggtgccataggttgtgagatgctgaagatgtgg gcgttaatgggtgtggcatgtggggagcagggtaacgtaactgttacagacatggatatcatagagaaatccaacctcaa cagacagttcctcttcagaccttgggatgttcagaaaaccaagtcctcaacagctgccaatgctgccaaagtaatgaatc ctggtatgaaggtaaaaccacaggagaacagagtgggacccgacacagagaatatttatgatgatgctttctttgaagca ttagacggagtggccaatgccctagataatgttgatgccagaatgtacatggacaggcgatgtgtttactacagaaagcc cctgctagagtcagggaccctggggacgaaaggcaacacacaggtggtgattccccaccttacagagtcctattcctcat cacaagatccccctgaaaaatccattccaatctgtacactcaaaaacttccctaatgctatagaacacaccctacagtgg gcccgtgatcagtttgagggtttattctgccagccagcggaggcagcatcacagtacattacagaccccaaattcatgga gaggacagtcaaacaacaaggcactcagccaatagagacactagaagcagtaaagaaggcattaatagacgacaaacctg cagatttccaggcttgtgtcgattttgcccgtaaattatgggaagagaactataataatactattcagcaattactcttc aatttcccacctgatcaggtaaccagttcaggagcaccattttggtcaggaccaaaaagatgcccacacccactcaaatt tgatctgaataatgaggtacatgtggactttgttgtagccacagctaaccttaaagctgagatgtatggacttaaacagg ttagagatcgtgatagtataaagactatgatcaagaaagtcaatgtgccagtattcaaaccaaaatcaggagttaagata gaagtatctgatgccgaaatggaagctagccggaaccagggttcagtagattcagaccagttagaaaatttacagaaaat gttgccgcctcttgacaaagtgaaaaatctcaaaattactcctatagactttgaaaaagatgatgatacaaatttccata tggactttatagttgcttgttcaaatttacgtgcagagaattacagtatacctccagcggatcgttcaaagagtaaatta atagcaggaaaaatcattccagccattgccacaacaactgcgttaatagtaggtcttgtgggtatagagatgatcaaatt gattcaaggacacaaaaaattagatccctacaaaaatggatttgtaaatttagcattgccattctttgcattctccgagc ctatatcagctcccaagaataagtactatgacacagaattttcattatgggacagatttgaagtacaaggagagatgaca ttaaagcaattcatagattacttcaagaatgagcacaagttagagataactatgctgtctcagggtgtatccatgctcta ttcattcttcatgccaccagcaaaacgcaaggaaagaatggagctgccgatgtcggaggtggtcaaacgagtatccaaaa agaagattcctagtcatgttaaagctctagtactggaaatttgctgtaatgatgaatctggagaagacgtagaaattccg tacgtcaagtataatctaccgcagtaa |
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Protein
| Protein ID | pfu_aug2.0_8.1_26624.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26624.t1 MAQNGTTDIDESLYSRQLYVLGKDAMKKMANSNVLICGMKGLGIEVAKNVVLGGVKSVTIQDTENVAWNDLSSQFFLREE EIGKNRAEISLPRLAELNNYVPVSSHTKSLTEDFVKGFKVVVLTNSSFEEQSKIGEICHKNDIKFIVAESRGLFGKIFCD FGEAFVVNDVDGEEPGNNMIADITKEAEGVVTCLDETRHGYEDGDHVTFSEVQGMTELNGCQPIKIKVLGPYTFSIGDTS GFGNYVRGGNVTKVKMPKTLKFKSFKEATDAPEILMTDFAKFDRPGQLHLGFQALSAYEEKHKRLPACRCKADADEFVKI VKEINGNSPAKVDEFDDEVLREFSYTCRGDISPMASFLGGVAAQEVMKSCSGKFSPIYQFLYFDALECLPEDKGTLTEES CKPKNCRYDGQTAIFGQTFQNTIGNLKYFLVGAGAIGCEMLKMWALMGVACGEQGNVTVTDMDIIEKSNLNRQFLFRPWD VQKTKSSTAANAAKVMNPGMKVKPQENRVGPDTENIYDDAFFEALDGVANALDNVDARMYMDRRCVYYRKPLLESGTLGT KGNTQVVIPHLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDQFEGLFCQPAEAASQYITDPKFMERTVKQQGTQ PIETLEAVKKALIDDKPADFQACVDFARKLWEENYNNTIQQLLFNFPPDQVTSSGAPFWSGPKRCPHPLKFDLNNEVHVD FVVATANLKAEMYGLKQVRDRDSIKTMIKKVNVPVFKPKSGVKIEVSDAEMEASRNQGSVDSDQLENLQKMLPPLDKVKN LKITPIDFEKDDDTNFHMDFIVACSNLRAENYSIPPADRSKSKLIAGKIIPAIATTTALIVGLVGIEMIKLIQGHKKLDP YKNGFVNLALPFFAFSEPISAPKNKYYDTEFSLWDRFEVQGEMTLKQFIDYFKNEHKLEITMLSQGVSMLYSFFMPPAKR KERMELPMSEVVKRVSKKKIPSHVKALVLEICCNDESGEDVEIPYVKYNLPQ |
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| Protein ID | pfu_aug2.0_8.1_26624.t2 |
| Definition | - |
>pfu_aug2.0_8.1_26624.t2 MSSRTESESPPAKKARTDLVEVDRITSNSLETNSATMAQNGTTDIDESLYSRQLYVLGKDAMKKMANSNVLICGMKGLGI EVAKNVVLGGVKSVTIQDTENVAWNDLSSQFFLREEEIGKNRAEISLPRLAELNNYVPVSSHTKSLTEDFVKGFKVVVLT NSSFEEQSKIGEICHKNDIKFIVAESRGLFGKIFCDFGEAFVVNDVDGEEPGNNMIADITKEAEGVVTCLDETRHGYEDG DHVTFSEVQGMTELNGCQPIKIKVLGPYTFSIGDTSGFGNYVRGGNVTKVKMPKTLKFKSFKEATDAPEILMTDFAKFDR PGQLHLGFQALSAYEEKHKRLPACRCKADADEFVKIVKEINGNSPAKVDEFDDEVLREFSYTCRGDISPMASFLGGVAAQ EVMKSCSGKFSPIYQFLYFDALECLPEDKGTLTEESCKPKNCRYDGQTAIFGQTFQNTIGNLKYFLVGAGAIGCEMLKMW ALMGVACGEQGNVTVTDMDIIEKSNLNRQFLFRPWDVQKTKSSTAANAAKVMNPGMKVKPQENRVGPDTENIYDDAFFEA LDGVANALDNVDARMYMDRRCVYYRKPLLESGTLGTKGNTQVVIPHLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQW ARDQFEGLFCQPAEAASQYITDPKFMERTVKQQGTQPIETLEAVKKALIDDKPADFQACVDFARKLWEENYNNTIQQLLF NFPPDQVTSSGAPFWSGPKRCPHPLKFDLNNEVHVDFVVATANLKAEMYGLKQVRDRDSIKTMIKKVNVPVFKPKSGVKI EVSDAEMEASRNQGSVDSDQLENLQKMLPPLDKVKNLKITPIDFEKDDDTNFHMDFIVACSNLRAENYSIPPADRSKSKL IAGKIIPAIATTTALIVGLVGIEMIKLIQGHKKLDPYKNGFVNLALPFFAFSEPISAPKNKYYDTEFSLWDRFEVQGEMT LKQFIDYFKNEHKLEITMLSQGVSMLYSFFMPPAKRKERMELPMSEVVKRVSKKKIPSHVKALVLEICCNDESGEDVEIP YVKYNLPQ |
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