Gene
| Gene Model ID | pfu_aug2.0_8.1_26626 |
|---|---|
| Locus | scaffold8.1 : 344177 ... 362328 : + |
| To GenomeBrowser | scaffold8.1:344177..362328 |
| Genes list of scaffold | scaffold8.1 |
| Synonym | pfu_aug1.0_38488.1_55657 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8.1_26626.t1 | 2 | 1 | THOC7 | 7 | 141 | 1.0e-33 | 116.5 | 1.1e-36 | 1.0e-33 | 116.5 |
| pfu_aug2.0_8.1_26626.t1 | 2 | 2 | THOC7 | 152 | 174 | 1.0e-33 | 116.5 | 1.3 | 1200.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8.1_26626.t1 | gi|676468119|ref|XP_009058106.1| | hypothetical protein LOTGIDRAFT_209758 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_8.1_26626.t1 | gi|148223784|ref|NP_001080651.1| | THO complex subunit 7 homolog [Xenopus laevis] | 0.0 |
| pfu_aug2.0_8.1_26626.t1 | gi|45360855|ref|NP_989103.1| | THO complex subunit 7 homolog [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_8.1_26626.t1 | gi|657572123|ref|XP_008289659.1| | PREDICTED: THO complex subunit 7 homolog [Stegastes partitus] | 0.0 |
| pfu_aug2.0_8.1_26626.t1 | gi|348510403|ref|XP_003442735.1| | PREDICTED: THO complex subunit 7 homolog [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_8.1_26626.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26626.t1 atggcttctgttagcgatgatgacataataaagaaacgcttactgatagagggggatggagggaatgatgataaacgact gaatagtttgctgaagtcttttgtacgttggtgtaattctgacgaaggagatgaggacagcaacttggcccatcagagaa tgcttgcacaattagcacaaagtgaatacaccatcgaaaagtcactttatgtacatcggatgaacttgagggagcaagaa aattatgagaaactctgtaaacaaattgaatcaaaaataaaggaagctacagagaaaatagctgaatgtaagagtgaact tcagcaggcaaaaaggatccgtaaaaacagacaagagtacgatgcccttgcaaaagtcattcagcagcatccagatcgac aaagtacaacaaagcagcttgagacactggacaaggatgttactttacttgaagagcagaaagaaacattggaacagaag ttggacctgagaaggaagcagttccatgtcctcatagcagcaattcatgaaatggaaaagattttagaggaggatgaagt caaggatgaagaaaatgaaagcaccatggacacaagctga |
|
Protein
| Protein ID | pfu_aug2.0_8.1_26626.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26626.t1 MASVSDDDIIKKRLLIEGDGGNDDKRLNSLLKSFVRWCNSDEGDEDSNLAHQRMLAQLAQSEYTIEKSLYVHRMNLREQE NYEKLCKQIESKIKEATEKIAECKSELQQAKRIRKNRQEYDALAKVIQQHPDRQSTTKQLETLDKDVTLLEEQKETLEQK LDLRRKQFHVLIAAIHEMEKILEEDEVKDEENESTMDTS |
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