Gene
| Gene Model ID | pfu_aug2.0_8.1_26633 |
|---|---|
| Locus | scaffold8.1 : 559648 ... 562316 : + |
| To GenomeBrowser | scaffold8.1:559648..562316 |
| Genes list of scaffold | scaffold8.1 |
| Synonym | pfu_aug1.0_14534.1_03512 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8.1_26633.t1 | 1 | 1 | PAX | 40 | 163 | 0.0 | 169.7 | 0.0 | 0.0 | 168.5 |
| pfu_aug2.0_8.1_26633.t1 | 1 | 1 | HTH_29 | 61 | 164 | 6.5e-06 | 26.2 | 4.0e-09 | 1.5e-05 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8.1_26633.t1 | gi|390351165|ref|XP_781786.3| | 1.96182e-44 | |
| pfu_aug2.0_8.1_26633.t1 | gi|33585947|gb|AAH55960.1| | Pax2-A protein [Xenopus laevis] | 4.06377e-44 |
Transcript
| Transcript ID | pfu_aug2.0_8.1_26633.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26633.t1 atggcatctttcattctgcctaacctctatggaagtcacgtacacttcccacataattttatgacgtcagttccgtttac cagtacgccaacagagaccaaagctccacttgtgagcaagcagggtgttaatcagcttggtggaacgttcatcaatggaa aaccactaccagactcggtacgacaagagataattcgccaatcggtcagtggagtcaaatcatgtgagatttcccgccaa ctcaaagtgtctcatggctgtgtgagtaaaattctcacccgttactatgcgactgggtctttgaagccagccagcactgg aggatcaaaaccgaaagtagcaacggatgaagttaaatctgctatcatagacataaagaaaaacaaccccgagatgtttg ctagagaagttctggatactgtaatcaacagaggactatgtccaaaggaaactgcaccgagtgttagctctgtaaacagg atcttgcgcagatattctctcggaagtaagcagttgggggataacaaagctgaaaccgaggctctccagcaatatcagag tacaggtcagcaaattactatgcagaatcattcgatcgtaaccggtccataccgtggttctggttcacacaaaaggaaat tagatgaacaaacctacgatacaaccatgcatccagcaaagattctcagaccagagtctcaccaagtgacaaccggttat ccttcaaccaatatggccatgactgctccatcaaagataaatagcatgaaattagaaaacttgagtatcctacctactga agccactaagatgacttcagttcaagtgattggaaatcaacctgtcnagcaatatcagagtacaggtcagcaaattacta tgcagaatcattcgatcgtaaccggtccataccgtggttctggttcacacaaaaggaaattagatgaacaaacctacgat acaaccatgcatccagcaaagattctcagaccagagtctcaccaagtgacaaccggttatccttcaaccaatatggccat gactgctccatcaaagataaatagcatgaaattagaaaacttgagtatcctacctactgaagccactaagatgacttcag ttcaagtgattggaaatcaacctgtctcgcaaactaacacccttccaataattcaaaaccagacaccctcttaccaaatt ccaagcatcaactctgtaccacaagtcagaaataatatgacagctccttcattggccaatacgacaagtgcacatacttc aaaatcgaaagaggcaaacaaatgttctgactttgccgaaaagattgagaagttgaagccaagcggatttccttactacc actcagtgatgggctggatgaacctgatccccatatcatatgacactatggcagatctaggattgcctatgtctatcatg tctaacgacagcaataacatattctatgagggaaattcattgcctcccaccacgccaaagttgccatctgcgcaagatac aagcatgcaagtaaataccgtcaaccatgcaaccaaattcgaccaatcaaatcaaagctaccgaacgattccagtttcat ctttaggacaaagccattctattacatcgacaaacgagatgaccaatgtcatgcaatgtccattgacccagtctggagga gctgttgcgaatgtacctctcaggattcccaatgtcatagaccatatcaaaaccgaaaccaataatcaagtacaaacaga acaacgttatccaaagacaaaggaagttacatcacaaaaggtgaaagtatctgtacatgccaacgaagacgaggccgtag ttgcggttgatatacagtcccattcgttcgacgattcctttgaggaaaccggttcatctttagattttagtgacgactgt agcgcagacattttagaaacgccaacagttttaccatattgcaaggttgtggaatccagaaaagtcagaaaggaactatt cccgactttgaatcgtacttattga |
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Protein
| Protein ID | pfu_aug2.0_8.1_26633.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26633.t1 MASFILPNLYGSHVHFPHNFMTSVPFTSTPTETKAPLVSKQGVNQLGGTFINGKPLPDSVRQEIIRQSVSGVKSCEISRQ LKVSHGCVSKILTRYYATGSLKPASTGGSKPKVATDEVKSAIIDIKKNNPEMFAREVLDTVINRGLCPKETAPSVSSVNR ILRRYSLGSKQLGDNKAETEALQQYQSTGQQITMQNHSIVTGPYRGSGSHKRKLDEQTYDTTMHPAKILRPESHQVTTGY PSTNMAMTAPSKINSMKLENLSILPTEATKMTSVQVIGNQPVXQYQSTGQQITMQNHSIVTGPYRGSGSHKRKLDEQTYD TTMHPAKILRPESHQVTTGYPSTNMAMTAPSKINSMKLENLSILPTEATKMTSVQVIGNQPVSQTNTLPIIQNQTPSYQI PSINSVPQVRNNMTAPSLANTTSAHTSKSKEANKCSDFAEKIEKLKPSGFPYYHSVMGWMNLIPISYDTMADLGLPMSIM SNDSNNIFYEGNSLPPTTPKLPSAQDTSMQVNTVNHATKFDQSNQSYRTIPVSSLGQSHSITSTNEMTNVMQCPLTQSGG AVANVPLRIPNVIDHIKTETNNQVQTEQRYPKTKEVTSQKVKVSVHANEDEAVVAVDIQSHSFDDSFEETGSSLDFSDDC SADILETPTVLPYCKVVESRKVRKELFPTLNRTY |
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