Gene
| Gene Model ID | pfu_aug2.0_8.1_26636 |
|---|---|
| Locus | scaffold8.1 : 595234 ... 635237 : - |
| To GenomeBrowser | scaffold8.1:595234..635237 |
| Genes list of scaffold | scaffold8.1 |
| Synonym | pfu_aug1.0_456.1_43681 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8.1_26636.t1 | 1 | 1 | DCP1 | 1 | 58 | 1.2e-16 | 60.8 | 7.2e-20 | 2.1e-16 | 60.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8.1_26636.t1 | gi|260814934|ref|XP_002602168.1| | hypothetical protein BRAFLDRAFT_97984 [Branchiostoma floridae] | 5.04467e-44 |
| pfu_aug2.0_8.1_26636.t1 | gi|527252343|ref|XP_005144470.1| | PREDICTED: mRNA-decapping enzyme 1B [Melopsittacus undulatus] | 2.0e-30 |
| pfu_aug2.0_8.1_26636.t1 | gi|504132564|ref|XP_004578895.1| | PREDICTED: mRNA-decapping enzyme 1B [Ochotona princeps] | 3.0e-30 |
| pfu_aug2.0_8.1_26636.t1 | gi|675860544|ref|XP_009015832.1| | hypothetical protein HELRODRAFT_64880 [Helobdella robusta] | 4.0e-30 |
| pfu_aug2.0_8.1_26636.t1 | gi|699640255|ref|XP_009878050.1| | PREDICTED: LOW QUALITY PROTEIN: mRNA-decapping enzyme 1B [Charadrius vociferus] | 5.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_8.1_26636.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26636.t1 atgatcctgaacagactagggctaaacaatcttatagaaccaatcaccaaggacctggagttccagcttcaagatccttt tcttctgtacagaaatgctaaagttatacatggaatatggttctatgataaggatgaatgtgccaggatcgggcagttga tgaatagccttttacagcttgcactagagcattacagagagaatcgtcaacgaagagtttccgagtcagacagtgtacag gagaaaactgagatggtatcagcaggagtaaaaaatgtagacatcctacagatgttgtccaaggctcaggatgagtatga taaggctaaaagtggagtacctcccaagccattcatagacaatcctaatgcctcagctatgaagtcctcagagatacacc gaccaaaaccactcaaagccagcaatgacgatgatgatactacagatcaggatagcaatcagaatgcgtcctcttcagca gcagcagctcctataagtttagagacactgttcagaaatgctagtcttcaacagcaaaaacagcaaggagaaaaaccaga agtcaaaaaaggtccaggatttcataggtctgtatcagaccaactacaacaagcattgcttcatctcatcaagaatgact caaatttcatagacactttgcatgaagcatatttaaacagtctaaaagacttggctaatttgaaatcctag |
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Protein
| Protein ID | pfu_aug2.0_8.1_26636.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26636.t1 MILNRLGLNNLIEPITKDLEFQLQDPFLLYRNAKVIHGIWFYDKDECARIGQLMNSLLQLALEHYRENRQRRVSESDSVQ EKTEMVSAGVKNVDILQMLSKAQDEYDKAKSGVPPKPFIDNPNASAMKSSEIHRPKPLKASNDDDDTTDQDSNQNASSSA AAAPISLETLFRNASLQQQKQQGEKPEVKKGPGFHRSVSDQLQQALLHLIKNDSNFIDTLHEAYLNSLKDLANLKS |
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