Gene
| Gene Model ID | pfu_aug2.0_8.1_26642 |
|---|---|
| Locus | scaffold8.1 : 797135 ... 811230 : - |
| To GenomeBrowser | scaffold8.1:797135..811230 |
| Genes list of scaffold | scaffold8.1 |
| Synonym | pfu_aug1.0_10212.1_68156 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8.1_26642.t1 | 2 | 1 | BTB | 21 | 121 | 1.5e-09 | 37.8 | 1.5e-11 | 5.6e-08 | 32.7 |
| pfu_aug2.0_8.1_26642.t1 | 6 | 1 | zf-C2H2 | 551 | 572 | 7.7e-06 | 25.9 | 0.0018 | 6.6 | 7.2 |
| pfu_aug2.0_8.1_26642.t1 | 6 | 2 | zf-C2H2 | 614 | 635 | 7.7e-06 | 25.9 | 0.004 | 15.0 | 6.1 |
| pfu_aug2.0_8.1_26642.t1 | 6 | 3 | zf-C2H2 | 676 | 689 | 7.7e-06 | 25.9 | 0.064 | 240.0 | 2.3 |
| pfu_aug2.0_8.1_26642.t1 | 6 | 4 | zf-C2H2 | 1214 | 1236 | 7.7e-06 | 25.9 | 0.00058 | 2.1 | 8.8 |
| pfu_aug2.0_8.1_26642.t1 | 6 | 5 | zf-C2H2 | 1241 | 1262 | 7.7e-06 | 25.9 | 4.5e-06 | 0.017 | 15.4 |
| pfu_aug2.0_8.1_26642.t1 | 2 | 2 | BTB | 1243 | 1270 | 1.5e-09 | 37.8 | 0.026 | 96.0 | 3.0 |
| pfu_aug2.0_8.1_26642.t1 | 6 | 6 | zf-C2H2 | 1265 | 1282 | 7.7e-06 | 25.9 | 0.29 | 1100.0 | 0.3 |
Transcript
| Transcript ID | pfu_aug2.0_8.1_26642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26642.t1 atggctgaaaacgaatacgagataccaggatattccagtcggatgtccacccagctgtataagctacaacaggatggcta tatgtgtgatgcagtgatagctacaaatagtggtatcatcaatgtacataagctggtcctcatggcaagcagtagccctt tgttgatggagagtgtgagaaagacagagaaaacaggtggatccatatgtatgattgaaattcccgctgagatagaagat gtcaagcgatttgtacaagctttgtataccggtaaaatattccttgaccaagactgtatagacagaataatcggaattgg ccaaatacttaaaatggaggaagagaccaaattccttgagaagatgaaaactgaattccaaaattcttgcaaaagggact ttcctcaggaaattgacgtcaaaaacagaaacgagactggtacaattacattgcaagtagatggcgagacaattaaagtt cagacagaggacagcataaaagacggtaccttacaaaacgaagttggaataacagctgagagtgatttaagcttagttga actaccatcttatggaagtgaaaacgatattgaaatgcacattcctggctttgaatataaaaatgaagaatcgggcacag gagtcaaaagagagaggtgtgatgattcatctcatgaggaacaaggggatggtgcaatgactgagtccaagcgtcagaaa gtatcagatgaggcagctgttaccaatgtaaaacaggaacctgatggaaatccacctgacacagaatcagtaaatcagaa cgaaaaagaangtagttctgttgaaaatagtattgtgaatctagaaagtaatcctgttgaaaatgtattaaatgttaagt ctaatgttgatactgcatcagatactgaaagttcacctgatgtgatcattgttagttcgagttttgctgacaactctttt tcagcagacaaacctgaccagagtagtgttgaccttaagaaggagccagaatttgaggtaagtgacaacagcaatataaa atctcagattactggtaatgaaaatgctgctcagataagcagacagatctctggtatagaggaaatctctgatgaaaact gccaaagcatgtctgatatatccaacgatgaactgccagattctccaatgaaaggtatagaggctaaaaagcctgtggaa tatgaaaacgtgtcggagtatgaaagtgtatcagatgactccggcaactggaaaggaatactgtatgaaaatgtatcgga tggttcatcaccaagtgtggttcttattgattatgacactgtctcagatgaaggatctatcgacaaagacttaatggaat atgaggtcatatctgaatgctcaagcttagaaaaaattcccattgaatatgaagttgtatcgggagatgaagaggaagtg agatcgaaagctcaagaaacggagtcatctataaaagaggatatagagataacagacggggacaagttctcggtaagtag ctcaaaaaagaccaacccgaccgtcgaaggaagtgagcaagtgaaagacgatattgatgatgggtctgagatttcaatgg aaacactggacgaggagcactatgatagtgatgatgatgttgccataattagatgttataaatgtacagctaactttatt gacaaggaggtttattatgagcacatgaaagaacatgaaagggatgaatttgatgcatacaagtatagagtagagtccaa tgaagatgattttgatgcttacaattatcaaatggagccacctcaggtcgatgagaaacaactttaccaggaactccttc gctgtgaagaatgtgatgaaaatttcttatcaaaagtcgcttttgaggatcatcgtacatatcataagagacagaagatg ctggaaaagctaaataaaatcgagaaggctctggacaaagatgaagttgacttagacatgtcaagcataagctcttttgg cagtgacacggagccccccatcagcaaacaatacaagcaaccagctgaacttgaacagcacaggcgatcagcctccagag aaaggtctataactctcgatttcttcagttcacctccacgggaccatcgtagatctcatgaaagatctagatcacctgtt tcacctccatcttataccgtacgtggtggacgtcattacagacgacacaagagcagctctccagatacgttggagagtat tggcagtttgtcagatgagagggacttttatgagagggaatattccagagaaaggagatctttatcaagggacaggagat ctctatcaagggaaaggcgatcattttcacgagagagatcactttcaagggacagcttctcagatttcgatcatcatcat catcatgaaaggagtcattcatatgatagcttttcttcaagcttcacgagtgacagttcccatgggatagcaagaaagaa aatggaaatgaatcttgatactgccttagaagaaatggtttctggaataaaagatgcatcatcacgtaagggaggctcta aaaagaagaaacgatcatcagagaaaaagtcaaacaaagccaaacaaagcttggatacctttgattggcttgcaagtcta cagaatccatctgaagcaaaaatggagaaatcaaaagttccattgaaagcaaatgctccagtggtacctccctcnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcattgtatggaagc tactcggttggtcatccatctaacccaatagcaagctcagtttttcaaggattgcagcctcagcatgcagcaggatcact ttctcagactttaacgtcacctgtttggccaaataaacctagctatcctactgtggcttcaaacccgataccgcaaggtc aagcacttacaaactcctttgttgcaccgaatcttagaagtacaaatcctgccgtcccttatgttaccccggtaaccaca gccagcacaacagttcctctgaaaggcattctcaagaatacagtcaagagtcagcctagtacaacaactatagcatcggc aacaatcttaagcagcaggcagcttgtcagcattccaattgttggaccacaatttgtgccgtcgaaagtgccgtcaacta gcagcagcattacacaagggcaaaagaaatctacacaagctgaagtattatctactttaggacctgtctttatccctaaa cccgcaaagcctactaagtggcccgcaaatctcagtgccctaaatgaaactccagatgaaacagaatcatcagagcattt gggagaaagtagtaacccaaatgtgatgttctttgaactcacacaagaagaggaagaacaaaagcgaacagaaattagaa aggctcgaatgcaacttcttcaaaagcttaaacatgccaagggggaagagaaagttcaacttcaaaaagaagttcatcga tctaagttgttggtccacaaactttaccataaactgatgaagtgtccgacttgtactttctacacaagagatccacgaga gtacaatagacatcaaagggtgagatgtcataacctgctcgtctgccaccactgtgaccttacgtttgccacccaggaag gtcttcaagaacaccttggaacgcataaaaaggtatgtgctatctgcggcgttaattttttcaacgatgaaatatataac gaacatttagtaaagcataaacagaacagttcagagaaaaaatga |
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Protein
| Protein ID | pfu_aug2.0_8.1_26642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8.1_26642.t1 MAENEYEIPGYSSRMSTQLYKLQQDGYMCDAVIATNSGIINVHKLVLMASSSPLLMESVRKTEKTGGSICMIEIPAEIED VKRFVQALYTGKIFLDQDCIDRIIGIGQILKMEEETKFLEKMKTEFQNSCKRDFPQEIDVKNRNETGTITLQVDGETIKV QTEDSIKDGTLQNEVGITAESDLSLVELPSYGSENDIEMHIPGFEYKNEESGTGVKRERCDDSSHEEQGDGAMTESKRQK VSDEAAVTNVKQEPDGNPPDTESVNQNEKEXSSVENSIVNLESNPVENVLNVKSNVDTASDTESSPDVIIVSSSFADNSF SADKPDQSSVDLKKEPEFEVSDNSNIKSQITGNENAAQISRQISGIEEISDENCQSMSDISNDELPDSPMKGIEAKKPVE YENVSEYESVSDDSGNWKGILYENVSDGSSPSVVLIDYDTVSDEGSIDKDLMEYEVISECSSLEKIPIEYEVVSGDEEEV RSKAQETESSIKEDIEITDGDKFSVSSSKKTNPTVEGSEQVKDDIDDGSEISMETLDEEHYDSDDDVAIIRCYKCTANFI DKEVYYEHMKEHERDEFDAYKYRVESNEDDFDAYNYQMEPPQVDEKQLYQELLRCEECDENFLSKVAFEDHRTYHKRQKM LEKLNKIEKALDKDEVDLDMSSISSFGSDTEPPISKQYKQPAELEQHRRSASRERSITLDFFSSPPRDHRRSHERSRSPV SPPSYTVRGGRHYRRHKSSSPDTLESIGSLSDERDFYEREYSRERRSLSRDRRSLSRERRSFSRERSLSRDSFSDFDHHH HHERSHSYDSFSSSFTSDSSHGIARKKMEMNLDTALEEMVSGIKDASSRKGGSKKKKRSSEKKSNKAKQSLDTFDWLASL QNPSEAKMEKSKVPLKANAPVVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLYGS YSVGHPSNPIASSVFQGLQPQHAAGSLSQTLTSPVWPNKPSYPTVASNPIPQGQALTNSFVAPNLRSTNPAVPYVTPVTT ASTTVPLKGILKNTVKSQPSTTTIASATILSSRQLVSIPIVGPQFVPSKVPSTSSSITQGQKKSTQAEVLSTLGPVFIPK PAKPTKWPANLSALNETPDETESSEHLGESSNPNVMFFELTQEEEEQKRTEIRKARMQLLQKLKHAKGEEKVQLQKEVHR SKLLVHKLYHKLMKCPTCTFYTRDPREYNRHQRVRCHNLLVCHHCDLTFATQEGLQEHLGTHKKVCAICGVNFFNDEIYN EHLVKHKQNSSEKK |
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