Gene
| Gene Model ID | pfu_aug2.0_80.1_00184 |
|---|---|
| Locus | scaffold80.1 : 3626 ... 20099 : + |
| To GenomeBrowser | scaffold80.1:3626..20099 |
| Genes list of scaffold | scaffold80.1 |
| Synonym | pfu_aug1.0_18610.1_11142 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_80.1_00184.t1 | 1 | 1 | CGI-121 | 35 | 158 | 9.7e-29 | 100.1 | 7.8e-33 | 1.2e-28 | 99.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_80.1_00184.t1 | gi|676455112|ref|XP_009053899.1| | hypothetical protein LOTGIDRAFT_215045 [Lottia gigantea] | 6.99949e-42 |
| pfu_aug2.0_80.1_00184.t1 | gi|727008120|ref|XP_010394001.1| | PREDICTED: EKC/KEOPS complex subunit TPRKB, partial [Corvus cornix cornix] | 2.0e-31 |
| pfu_aug2.0_80.1_00184.t1 | gi|669295003|ref|XP_008640752.1| | PREDICTED: EKC/KEOPS complex subunit TPRKB [Corvus brachyrhynchos] | 3.0e-31 |
| pfu_aug2.0_80.1_00184.t1 | gi|683903095|ref|XP_009085064.1| | PREDICTED: EKC/KEOPS complex subunit TPRKB [Serinus canaria] | 4.0e-31 |
| pfu_aug2.0_80.1_00184.t1 | gi|498997406|ref|XP_004553979.1| | PREDICTED: EKC/KEOPS complex subunit TPRKB [Maylandia zebra] | 5.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_80.1_00184.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00184.t1 atggcgatcaagcgcgaaatcacgggttgggaccccctggaccccccagggaggaggggtagaacccctggaatttgtcc ccgaatccttattttttttcagatcctggatccatttcaagttattgtggcagtgaataaggcagttcatcagcagaaaa tcaacaaaatgatgacaaagactgtccattcagaaatcctattttcactgtctcctagaaagaatatttcaaatgcattt aagacctttggaatgggagataaagatacaagtgtgtttgtcgccatcttaaatgatcatgataaatcaaccatgtcagt gatacaaaatcttatcaagggacgtcgggtagatccttatcaagtctcggagctcacaaacttacaaagcattaaagagg tgtacaacttgtcgcaaacagagctgtcagtatcaaatactctggatgctgtagtttcaaggatagctagtaaagacatt gtacaagtatag |
|
Protein
| Protein ID | pfu_aug2.0_80.1_00184.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00184.t1 MAIKREITGWDPLDPPGRRGRTPGICPRILIFFQILDPFQVIVAVNKAVHQQKINKMMTKTVHSEILFSLSPRKNISNAF KTFGMGDKDTSVFVAILNDHDKSTMSVIQNLIKGRRVDPYQVSELTNLQSIKEVYNLSQTELSVSNTLDAVVSRIASKDI VQV |
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