Gene
| Gene Model ID | pfu_aug2.0_80.1_00188 |
|---|---|
| Locus | scaffold80.1 : 116501 ... 127002 : - |
| To GenomeBrowser | scaffold80.1:116501..127002 |
| Genes list of scaffold | scaffold80.1 |
| Synonym | pfu_aug1.0_45273.1_12575 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_80.1_00188.t1 | 2 | 1 | zf-CCHC | 852 | 867 | 2.0e-12 | 46.3 | 1.7e-09 | 3.7e-06 | 26.6 |
| pfu_aug2.0_80.1_00188.t1 | 2 | 2 | zf-CCHC | 875 | 890 | 2.0e-12 | 46.3 | 3.0e-08 | 6.4e-05 | 22.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_80.1_00188.t1 | gi|459185904|ref|XP_002123084.2| | PREDICTED: uncharacterized protein F54H12.2-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_80.1_00188.t1 | gi|390364184|ref|XP_793165.3| | PREDICTED: uncharacterized protein F54H12.2-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_80.1_00188.t1 | gi|390333904|ref|XP_788559.3| | 0.0 | |
| pfu_aug2.0_80.1_00188.t1 | gi|665807571|ref|XP_008552069.1| | PREDICTED: uncharacterized protein F54H12.2-like [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_80.1_00188.t1 | gi|751235716|ref|XP_011171651.1| | PREDICTED: uncharacterized protein F54H12.2-like [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_80.1_00188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00188.t1 atgattcagacagatgagaccagcatcagaatacaatggaaagccgttactttggaggaaaatgaagtgtatgaggtcct atgcaaatcagagaaggaaaatcagtggagagtgtacgtgtctgattccgggggaaatgaattgaatgaattggaagtaa acaagctggaatatgataccatgtataaattcaaatgcagagtgaaaaataacgaatcacaggagaacggggcatgtgga gaggaaagcgattggattgctactgaacaggacccttgttggaaccagggattgctcctttggcttcaaaattatgagga cttcgagatggagcacacaaagaaaatgttactggcagaacctaaattgttggagggattgcagcatcacgatgtagtga gaaatcccacatttaaatccatgacaagacttgacgacgagttgcagtctattcttcaaagagatgatctgtccatggga gaaaaaaacgagcatgattcatcagaatcagatacgttatctagtagtttggagacgttaacagatgacaaacccgagtt caagtcatcattggcacaagcttacgaatcagatccagaaagctttgaacaagaggaattcgacgctggtgtttatatag ctccttgggtgtgcgatgtgacactaggatttcattctctgtatatctacagtaacatcgtagagcctagtatgaaagga tcaaaagcaatgggtaaacaagtcttatcaacaggacttgacattgctaatgatttacttagtggagaaaacgtacgcac atccacagaacgacgactgaaagaagcgggaagaaatatcatgaatcaagcaagaggcagaatatcaaaaccacccggag aacctaatcgaaaggagttggacttgtttgctgttccaccaacgcaagcaagcattgaatatggacattgggtagaacat cggccattgtcttctatcaccgactcgggacctatagaatttgatatttccggttcaggggatgattatttggatgtgaa caacaccttcttgtatttgcaagccaaaataatcgcggcaaacaataacgctaacctcgacgctcagtcagatgtagggc ctgtgaacaattggttgcattcactcttcagccaagtcaacatttctttaaacgaaaaactgatatccatgccggccata acttatgcatacagagctttcctggagaaccttctaagctatggcaaatcagcaaaggaatcgcaactcacctccgagat gtgttacaaagatagcagtagtcatatggaagccagaacagatgataatgctggctttactaaacgaaaagcattaatcg cccgtagcaaaataccaataatgactaaaatcaaaatcatggacgctgccttatttgtgcggaaagttaggatcagtaac acggtcagaatggctcacatcaaagcttttgagagagggacagccaaatatctcattaagcgtattgagactaaagcatt tacagttgccattggaagcatgggtatcaacaaagagaacctgttccttggaaaaatgcctaagcgcatttttgttggtc tggtagacaatgatgcttacaatggagtagctacgaaaaatcctttcaattccaagcacaacaacattgagtttatgaca ctctatgttgacggacagcagattccagccaaacctttgcaacctaactttggacgcagtcgttttattcgcagtaattc aggcctttttacggggtctgggaagatcttccacgatgaaggaaacgatatcagtagggaagaatatggaaatggctata cagtatttggttttgatctgactcaagacttatctgaagcaggtcatttccaccttataaagtatggtaacatgagactg gaaattcacttctctcaagccttggcagaaatcgttatgagacaaaatgtaggatcatctttccttggtgtgtttgctcg aaataggatcccctcagtgaatacattaccgtgctcgcttgtctgcaacaccgatctgaacagccagttgggtcaacact ggancaacattgactttatggcactctatgttgacggacagcagattccagccaaacctttgcaacctaactttgaacgc agtcgttttattcgcagttattcaggccttttcacggggtctggaaagatcttccacgatgaaggaaacgttatcagtag ggaaaaatatggaaatggctatacagtatttggttttgatctgactccagacttatctgaagcaggtcatttccacctta taaaacatggtaacctgagactggaaattcacgtctctcaagccttggcagaaacccagcctgcagacaacagcatggac gacattcatagcaattgtcagcgcatgaccgccatgatggaagatgtacagacatccatttccaagatgcaagccgacat ccatacattgatggataacaagagaaatgcaaaagaaggagacgaaccaccaaagaagaaagccagatacgtatgttaca attgcaatgaagagggacattttgttaccgaatgtcctcagccgcccaagaagcagaatgatatttgctacaagtgccaa ggcacgggacactggaccagagactgtcctatacaacaggaatacaacacatatccgggacctaacaactatggacccaa ctacaggccaaacaaccccagacccatctacggagcaaacagaggacgcccacctatggagagacagaatgtgaggccac agaacaatgcatag |
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Protein
| Protein ID | pfu_aug2.0_80.1_00188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00188.t1 MIQTDETSIRIQWKAVTLEENEVYEVLCKSEKENQWRVYVSDSGGNELNELEVNKLEYDTMYKFKCRVKNNESQENGACG EESDWIATEQDPCWNQGLLLWLQNYEDFEMEHTKKMLLAEPKLLEGLQHHDVVRNPTFKSMTRLDDELQSILQRDDLSMG EKNEHDSSESDTLSSSLETLTDDKPEFKSSLAQAYESDPESFEQEEFDAGVYIAPWVCDVTLGFHSLYIYSNIVEPSMKG SKAMGKQVLSTGLDIANDLLSGENVRTSTERRLKEAGRNIMNQARGRISKPPGEPNRKELDLFAVPPTQASIEYGHWVEH RPLSSITDSGPIEFDISGSGDDYLDVNNTFLYLQAKIIAANNNANLDAQSDVGPVNNWLHSLFSQVNISLNEKLISMPAI TYAYRAFLENLLSYGKSAKESQLTSEMCYKDSSSHMEARTDDNAGFTKRKALIARSKIPIMTKIKIMDAALFVRKVRISN TVRMAHIKAFERGTAKYLIKRIETKAFTVAIGSMGINKENLFLGKMPKRIFVGLVDNDAYNGVATKNPFNSKHNNIEFMT LYVDGQQIPAKPLQPNFGRSRFIRSNSGLFTGSGKIFHDEGNDISREEYGNGYTVFGFDLTQDLSEAGHFHLIKYGNMRL EIHFSQALAEIVMRQNVGSSFLGVFARNRIPSVNTLPCSLVCNTDLNSQLGQHWXNIDFMALYVDGQQIPAKPLQPNFER SRFIRSYSGLFTGSGKIFHDEGNVISREKYGNGYTVFGFDLTPDLSEAGHFHLIKHGNLRLEIHVSQALAETQPADNSMD DIHSNCQRMTAMMEDVQTSISKMQADIHTLMDNKRNAKEGDEPPKKKARYVCYNCNEEGHFVTECPQPPKKQNDICYKCQ GTGHWTRDCPIQQEYNTYPGPNNYGPNYRPNNPRPIYGANRGRPPMERQNVRPQNNA |
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