Gene
| Gene Model ID | pfu_aug2.0_80.1_00194 |
|---|---|
| Locus | scaffold80.1 : 276541 ... 345162 : - |
| To GenomeBrowser | scaffold80.1:276541..345162 |
| Genes list of scaffold | scaffold80.1 |
| Synonym | pfu_aug1.0_3851.1_30548 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_80.1_00194.t1 | 1 | 1 | PA26 | 190 | 422 | 0.0 | 278.9 | 0.0 | 0.0 | 278.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_80.1_00194.t1 | gi|524864988|ref|XP_005089326.1| | PREDICTED: sestrin-1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_80.1_00194.t1 | gi|260835138|ref|XP_002612566.1| | hypothetical protein BRAFLDRAFT_219671 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_80.1_00194.t1 | gi|524864986|ref|XP_005089325.1| | PREDICTED: sestrin-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_80.1_00194.t1 | gi|242012365|ref|XP_002426903.1| | P53 regulated pa26 nuclear protein sestrin, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_80.1_00194.t1 | gi|585719972|ref|XP_006813000.1| | PREDICTED: sestrin-1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_80.1_00194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00194.t1 atgacatcggtgccatgccacaccaacaaccctggtatccctgatgaagagacactacgtttcctgcatagtctgtctaa tcgtgatcccgctgcgcgtcaccaagctatgacaagcctccggtccactatagataactggctacatgggtatggaagcc cacctgatagctctatcattcagaattctgccccgtatccaagtacaagtcatctacaagcacatcttcctaacatacta cgactgtcagaatgttgtccgtttgatgacatcagggaatggtgtaaaggccttctagacgagctgaaggagagagggaa cggtctgaaggtccctaggaggatagggcgtggtcccagcactttcatccccaaagaagagaatacgtctaggaaagaag ttttgatgtttggattcccatttgactgttatcatcctaaaaatagtgtttttgctgacttgatcaaaacggaatcatta gatcaatcaatgtgtaaaaactgctatattgtggacaatagaaaagggtgttatatgaactattatacaaacagcagtag agagattaatggaaatgaccagacccagtctttatttgttgacgcctttttacaaaacaataggctggattatgtaaccc agctcatgggatttcatccctgttatttggaatgctttttgaggactcaacaatatttactgcggggtgatgggcctcta ccgttccattttagacactacattgccatcatggcggccagcaggcatcagtgtgcttacttaatccacttgcacgaaca agaattcatcctacaaggcggggactgtgaatggttgaagaacccggcctatataccaaagaaacttaaagatctgtacc acgtcaataaaatcctggcccaccgtccatggctactcaacaaatcacacatcgagaagctgaccagaggtaaggacaac tggtctgtatcagaggttgtccaggcattaatattactggcacacttccatgcgttatgttcgtttgtctacggatgtgg aatcaaagacgaggtggatcataccagtcactccttcaggccaccctctccatcagataccggatctaacgattctgatg aattaagtgatagctctgaacctgagataggaatggaagtccttataggaagaatgaagaaattacaggaagatgaagaa gaaaccactgaggaggagaggttgaagagatttgaaaaagtggagacacaaaatgctgaatgtccttcagatcctgactg ttcagttgttatttatgatgccaaaaatgattccattttcgtaaatttaactggttacgtttcggtcggtgcaatatcat acgatctaatacttaaacgaggggacgccattttacataatataacatcaacgatggatgtccaactcacaaacttggaa ataggggaaagttatactctaagcttggctgcggttggacctggaggtttaagaagcaagcaaagttgtcaaaaaactgt atacacaagtatgcagtataagtatggcaaatctaaatctaaattgttagtgtcgaagccaaaggaagcaagagctgatt tgtggttatctattattctagaggcagaaaggtttgttggggtatgcccagacgctacaaatgtaccttatgcaagcgcg aaccaaatcaaagagaaagaagaaatgttacagcggatcaaagaacgttacttgaacgtcgttttggtgacaaccgctct tcgacacgagaaaaccaggattaactttgatgatgaaagatctttatcagatgaggaatatttgtcattacttggagttg ggaaagctgcattcaaggatatgctaacatatttagatggcctggtacgcaacacacccgccaaaagtacgaaaacaagt cttgccattttcttattaaagatgagatctggcatacaagctgaaatgccgaccttcctgaggaaantggatgataagaa tttgcatcgtcgctctgcatcatgggtggcaatggaggaaataaaagatttccctaggttagatgaggagcagttacggt tcctgacatgtggaacataccaattaaagttaagcgcaaactacacgcaggaacatctagacggcaactgtgacatccat ggacataaagatgaaaacgggttgttgcgtgttagaatacggagcaggcatgtctccgcaaagacatacttgttgtggat tcgatatgacgaatgttacgtcacagcttggtactgcaggtgtcgcgccggctccagggttgtcggtatgtgtgctcatg tggctgctgtcatttggttccttgggaatggtcgtcatcagcagacagagaaatatggagtccaagactggagtacattc ttgcaggatgcatcaaaagtccctgaagctgtcgatcaatcagatgatgaagagaatatcgatacagaggaataa |
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Protein
| Protein ID | pfu_aug2.0_80.1_00194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00194.t1 MTSVPCHTNNPGIPDEETLRFLHSLSNRDPAARHQAMTSLRSTIDNWLHGYGSPPDSSIIQNSAPYPSTSHLQAHLPNIL RLSECCPFDDIREWCKGLLDELKERGNGLKVPRRIGRGPSTFIPKEENTSRKEVLMFGFPFDCYHPKNSVFADLIKTESL DQSMCKNCYIVDNRKGCYMNYYTNSSREINGNDQTQSLFVDAFLQNNRLDYVTQLMGFHPCYLECFLRTQQYLLRGDGPL PFHFRHYIAIMAASRHQCAYLIHLHEQEFILQGGDCEWLKNPAYIPKKLKDLYHVNKILAHRPWLLNKSHIEKLTRGKDN WSVSEVVQALILLAHFHALCSFVYGCGIKDEVDHTSHSFRPPSPSDTGSNDSDELSDSSEPEIGMEVLIGRMKKLQEDEE ETTEEERLKRFEKVETQNAECPSDPDCSVVIYDAKNDSIFVNLTGYVSVGAISYDLILKRGDAILHNITSTMDVQLTNLE IGESYTLSLAAVGPGGLRSKQSCQKTVYTSMQYKYGKSKSKLLVSKPKEARADLWLSIILEAERFVGVCPDATNVPYASA NQIKEKEEMLQRIKERYLNVVLVTTALRHEKTRINFDDERSLSDEEYLSLLGVGKAAFKDMLTYLDGLVRNTPAKSTKTS LAIFLLKMRSGIQAEMPTFLRKXDDKNLHRRSASWVAMEEIKDFPRLDEEQLRFLTCGTYQLKLSANYTQEHLDGNCDIH GHKDENGLLRVRIRSRHVSAKTYLLWIRYDECYVTAWYCRCRAGSRVVGMCAHVAAVIWFLGNGRHQQTEKYGVQDWSTF LQDASKVPEAVDQSDDEENIDTEE |
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