Gene
| Gene Model ID | pfu_aug2.0_80.1_00198 |
|---|---|
| Locus | scaffold80.1 : 447832 ... 472857 : + |
| To GenomeBrowser | scaffold80.1:447832..472857 |
| Genes list of scaffold | scaffold80.1 |
| Synonym | pfu_aug1.0_12957.1_61118 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| organic cation transporter | GO:0006915 GO:0022857 GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_80.1_00198.t1 | 1 | 1 | Sugar_tr | 36 | 409 | 1.6e-27 | 96.1 | 4.3e-31 | 2.1e-27 | 95.8 |
| pfu_aug2.0_80.1_00198.t1 | 2 | 1 | MFS_1 | 55 | 251 | 3.8e-25 | 88.3 | 3.7e-19 | 1.8e-15 | 56.5 |
| pfu_aug2.0_80.1_00198.t1 | 2 | 2 | MFS_1 | 277 | 425 | 3.8e-25 | 88.3 | 2.1e-13 | 1.0e-09 | 37.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_80.1_00198.t1 | gi|676473900|ref|XP_009059970.1| | hypothetical protein LOTGIDRAFT_153985 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_80.1_00198.t1 | gi|195390737|ref|XP_002054024.1| | GJ24209 [Drosophila virilis] | 0.0 |
| pfu_aug2.0_80.1_00198.t1 | gi|195444372|ref|XP_002069836.1| | GK11735 [Drosophila willistoni] | 0.0 |
| pfu_aug2.0_80.1_00198.t1 | gi|557775183|ref|XP_005187238.1| | PREDICTED: organic cation transporter protein [Musca domestica] | 0.0 |
| pfu_aug2.0_80.1_00198.t1 | gi|195060836|ref|XP_001995869.1| | GH14185 [Drosophila grimshawi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_80.1_00198.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00198.t1 atgaagtcatctcctgtacttttaaaggttaggaaccttgaggaatccatacggaagggagattatgcaggtagcatttc atcgtcaagcaactccatcaagaccaatatagtgtcgtcatcgatagcctttgtaacaggatcacaacatgaaggtatca atagttttggtagacgccctatgtttttcgcagggttagtttccttgttgatagcgggatgtgttgcagcagcatcacca aatatgtatgtttttattccgttctacatactacagggagcggcacagacaggactgtttttggtcgcctttactatgtg cacagaattagtgggtaagagttaccggttgatggccgggttccttatccaggggttttacgccttagggtacatggctc tctctggtatcgcctacctgatacaagactggcgatatatagaggtcgccatcaccgtgcctgtcatcatcttctctgtt tatctgtttgtattacctgagtctgtgcgatggcagttatcaaagaacaaattagaagaagctaaagtaaccttacggaa agtggcagacacaaacaaagtccatataacagatgaaatgatgaccaatcttaacgattctggagacaagatgccagatg ttaacaaaaaatacacaataattaacttgtttttccctttgaaaatgttacttctctcactcaacgtttggttcaactgg ttagtgaattccatggtatattatggtctgtcgctgggaacggataacttgggaggggatccttacattaactttctgat tgccggtgccgttgagataccagcctaccttctgtgtgtcctctgtctgaacagacttggtagaagatggcctctggctc tcacaatgattgtaggtggtgcttgctgtatagcctccggattcatcccagattcatcaggactcctcccattgaagatc acccttgcaatgtttggtaaatttgggatcaccgcatcatacgcaatcatctatctcatggctgctgaagttttccctac tgtcgtcagaaacattggaatgggtgtttcatctatgtgtgctagaattggaggtatgttgtcgccgcagatattggagt tacagaatatctgggtcccccttcctctaatagtgttcggtgccttgtctgcattagctggattccttgccctcctatta ccagagactgctggcagacccctacctcagcttatagaggatgtcacaaaacccaaacagacaggaacggaacagcttcg acaagacagctcttgtgacccagtggttcagaaagacaccctcttttga |
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Protein
| Protein ID | pfu_aug2.0_80.1_00198.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00198.t1 MKSSPVLLKVRNLEESIRKGDYAGSISSSSNSIKTNIVSSSIAFVTGSQHEGINSFGRRPMFFAGLVSLLIAGCVAAASP NMYVFIPFYILQGAAQTGLFLVAFTMCTELVGKSYRLMAGFLIQGFYALGYMALSGIAYLIQDWRYIEVAITVPVIIFSV YLFVLPESVRWQLSKNKLEEAKVTLRKVADTNKVHITDEMMTNLNDSGDKMPDVNKKYTIINLFFPLKMLLLSLNVWFNW LVNSMVYYGLSLGTDNLGGDPYINFLIAGAVEIPAYLLCVLCLNRLGRRWPLALTMIVGGACCIASGFIPDSSGLLPLKI TLAMFGKFGITASYAIIYLMAAEVFPTVVRNIGMGVSSMCARIGGMLSPQILELQNIWVPLPLIVFGALSALAGFLALLL PETAGRPLPQLIEDVTKPKQTGTEQLRQDSSCDPVVQKDTLF |
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