Gene
| Gene Model ID | pfu_aug2.0_80.1_00199 |
|---|---|
| Locus | scaffold80.1 : 474693 ... 493561 : - |
| To GenomeBrowser | scaffold80.1:474693..493561 |
| Genes list of scaffold | scaffold80.1 |
| Synonym | pfu_aug1.0_12957.1_61120 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_80.1_00199.t1 | 1 | 1 | DUF563 | 284 | 512 | 1.0e-23 | 84.3 | 6.0e-27 | 2.2e-23 | 83.2 |
| pfu_aug2.0_80.1_00199.t1 | 1 | 1 | TIR_2 | 872 | 967 | 1.7e-19 | 69.8 | 9.8e-23 | 3.6e-19 | 68.7 |
Transcript
| Transcript ID | pfu_aug2.0_80.1_00199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00199.t1 atggctaggtccctccctcgtcgcctcctaacgttctgttgtggatacagattattgctgatcttcctggaatttgtttt acattcatcagtgcggattcgaaccatgatatctacagtacgactacagcagattctgactgtaggactgttaacatacc tgtacatgacagtcctcttcatgtttcagaatagtcgatattccacgtggcagaggtactataggaacctctcaaatgac agccttcccgaggaggtgtacctcagtaatattacaggtgtggattataattactttgaaattccttcggaaaaagtata ttacgaatataagaaggcagagatagattatcctgatagcaaagtttcaaaagtaaatgtgccgcaggttaaaataccca tcgttgcaagtttgaattcaaaaataacaacagtgaaaatttcaaaatatgaatatcttaataaaaaatttgctttgaat gaatatcctgtatctaattggataagtaatcacgtatctctgtgcgatagtaaattccaaggatatgataataaattcgc gcgctttagtgacgtaattctagatccaaaacactgcaaagggcgtcgaggtggagaggatatgtggacggttatgaaac agcccgaaagtgacgaatatttgaaactgaaatttggttatttccgtatgaattgtggcggtaaaacgttatactataaa ttcagtccaaaagaccatctgatgtcatggatggcatcaacaaaaagttcaactggagtaaatctgagagaggaaaatat agattatgttgataaattcacgatcgccataactcgttatgaatacgtgaatatgtatcacacgatgacagatttttaca atgctttcctcatgctactgatattcaatcaggatccatcagatgtgaacattctgtgggtagacgcccatccgaaaggc ggccttgactcgatatggtcaaacttgttcgggaacgtcctgagggcaggcgatctacacgaaaagaccaagttccgtga tcttgtttggggtataacgggatataacagcttgttaaacaatcatgattacccagttgtcccatatctggaggaattca gggacttcttcctaaatcaacacggagtttccaacaaaaagtcattaaattgtgctactgtatctatgttgatcatttgg agaagaggatatgtcgctcatccaaggaatccacgtggcaaagttggcaggaaaattaaaaatgagaaggaactggaaac gtctctaaaacgttcctttcctcagcatattgtccgtggagaacagttggacacgatggacattaaagaacagctaaatc tcatatcgcgcaccgacatccttataggcatgcatggcgcaggcctgtctatgacgctcttcctgccgcggcatgccggc gtcgtggagttgtaccctaggtattggtccacagcaaataaacatttcaaagccatggctgcatggagaaagcttcatta cagacaatggcaaaatagagacagaaaaagagagtttcctgaccaatttacttatattccaccggaagtgcttatcaaaa tggtccaaacaagtaaaactacagacacaagaaaagcaagtctaactgttcctaccaaccatcacaactccaccgaccat cagagccctgtaaccatgtctaacccaccaaaaaggaagctacaacaccgtacagtgtccatcatcaaccaggaggtgga agtggctcttgttacgatgaatcctgaacttaaaaatgtcaaggacaaatacggacagagggcatcagagattaaagaca taaacaatcgtaacaagcgggacaaagatgacatggatgaagaataccagaaaattaaagacataaacaatcgtaacaag cgggacaaagatgacatggatgaagaataccagaaagtttataagctgacaagatccgtcaacgacatatttcacgaaca caatgaccataaacaaagggccttcctcggcagttatctggcaaaactggggtattgtctttatgcgatttctgacatcc cgagtattttagagttatttcgcatccaaagtgatgtgaagttaatcactcttcttgcattgtcacacataatgaatgaa gaggaaaatagaaaactcactgcagacaaaacgattctggaatttctcctggaaatgttgtcaaaagctgcagattcaaa cgatagacggcattttggtttctccgttcatgaactagtcgacggattagcaaatttcgcaaagaatgataataataagt atttgttaatggacatgaaagccttggatcttctgagaaggatcatcatgaaagggtccatcatagaacagactgctgta gctaaggcattatgggaactcgccttcttgaagaaaaatagagaaattattttgaaagacaaagaattgtacaaattgct tcaaaaattgaaaacgcacgatgttgaggagctgaagaacgctgcagatggagcttgttttgttattgaccagaaagatg ccccagctgctgtgaagaaagagccaccaaaatcagcaaagagggatggtcacattatgataagctacaactgggcagat cagaaagtactcattaggatcaaggaatggttaatgaaagatggatttaacgtttggatggacatagaaaacatggaggg atctttgctggagagcatggcaaggggtattgaaaatgccagtgttgtacttctctgttactcggaaaagtacaaagaca gtcagaattgtagaacagaggcagagtacacctacaaactgaagaaagagaccattcccctaaggatgcagacaaactac gcaccagatggttggcttggcattctgattggatctaaattgttctatgacttcagtggagtcaaatacccaatagaatc taagtacaaggaattacttcgtgctctcaataatcaggattccataccggaagaacctacagcaatttcaaaattgcagg ctccggaatctttctatcgatgtatacaagagaagctaggaatgaagagtttggaagagttgatgcgcttcagtgatgcc atagagagtttggaatatatgacttaa |
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Protein
| Protein ID | pfu_aug2.0_80.1_00199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00199.t1 MARSLPRRLLTFCCGYRLLLIFLEFVLHSSVRIRTMISTVRLQQILTVGLLTYLYMTVLFMFQNSRYSTWQRYYRNLSND SLPEEVYLSNITGVDYNYFEIPSEKVYYEYKKAEIDYPDSKVSKVNVPQVKIPIVASLNSKITTVKISKYEYLNKKFALN EYPVSNWISNHVSLCDSKFQGYDNKFARFSDVILDPKHCKGRRGGEDMWTVMKQPESDEYLKLKFGYFRMNCGGKTLYYK FSPKDHLMSWMASTKSSTGVNLREENIDYVDKFTIAITRYEYVNMYHTMTDFYNAFLMLLIFNQDPSDVNILWVDAHPKG GLDSIWSNLFGNVLRAGDLHEKTKFRDLVWGITGYNSLLNNHDYPVVPYLEEFRDFFLNQHGVSNKKSLNCATVSMLIIW RRGYVAHPRNPRGKVGRKIKNEKELETSLKRSFPQHIVRGEQLDTMDIKEQLNLISRTDILIGMHGAGLSMTLFLPRHAG VVELYPRYWSTANKHFKAMAAWRKLHYRQWQNRDRKREFPDQFTYIPPEVLIKMVQTSKTTDTRKASLTVPTNHHNSTDH QSPVTMSNPPKRKLQHRTVSIINQEVEVALVTMNPELKNVKDKYGQRASEIKDINNRNKRDKDDMDEEYQKIKDINNRNK RDKDDMDEEYQKVYKLTRSVNDIFHEHNDHKQRAFLGSYLAKLGYCLYAISDIPSILELFRIQSDVKLITLLALSHIMNE EENRKLTADKTILEFLLEMLSKAADSNDRRHFGFSVHELVDGLANFAKNDNNKYLLMDMKALDLLRRIIMKGSIIEQTAV AKALWELAFLKKNREIILKDKELYKLLQKLKTHDVEELKNAADGACFVIDQKDAPAAVKKEPPKSAKRDGHIMISYNWAD QKVLIRIKEWLMKDGFNVWMDIENMEGSLLESMARGIENASVVLLCYSEKYKDSQNCRTEAEYTYKLKKETIPLRMQTNY APDGWLGILIGSKLFYDFSGVKYPIESKYKELLRALNNQDSIPEEPTAISKLQAPESFYRCIQEKLGMKSLEELMRFSDA IESLEYMT |
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