Gene
| Gene Model ID | pfu_aug2.0_80.1_00200 |
|---|---|
| Locus | scaffold80.1 : 502402 ... 507474 : + |
| To GenomeBrowser | scaffold80.1:502402..507474 |
| Genes list of scaffold | scaffold80.1 |
| Synonym | pfu_aug1.0_12957.1_61121 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g protein-coupled | GO:0004871 GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_80.1_00200.t1 | 1 | 1 | 7TM_GPCR_Srsx | 33 | 154 | 3.3e-10 | 39.5 | 1.9e-13 | 4.0e-10 | 39.2 |
| pfu_aug2.0_80.1_00200.t1 | 1 | 1 | 7tm_1 | 40 | 166 | 4.6e-29 | 101.3 | 3.0e-32 | 6.3e-29 | 100.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_80.1_00200.t1 | gi|171850884|emb|CAP17415.1| | G Protein coupled receptor [Crassostrea gigas] | 3.0e-38 |
| pfu_aug2.0_80.1_00200.t1 | gi|171850882|emb|CAP17414.1| | 3.0e-37 | |
| pfu_aug2.0_80.1_00200.t1 | gi|171850880|emb|CAP17413.1| | G Protein coupled receptor [Crassostrea gigas] | 8.0e-37 |
| pfu_aug2.0_80.1_00200.t1 | gi|676458111|ref|XP_009054869.1| | hypothetical protein LOTGIDRAFT_118379 [Lottia gigantea] | 1.0e-36 |
| pfu_aug2.0_80.1_00200.t1 | gi|676439762|ref|XP_009048957.1| | hypothetical protein LOTGIDRAFT_140886 [Lottia gigantea] | 8.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_80.1_00200.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00200.t1 atgattgctcaaaattctactattacagatttggtgccccttgcatttgtttcaagggagcgaagtctaccgaccatcgt agttaacgccgttcttttcgtggttggttttatagctaacttaacggtgtttgttactttgttcaggaaccgtaaatccc agtcacggtgtaaccgatttatcctccacctatcctttgccgaccttgccgtgataaccatcgtgccaccaacagaaatc gcctggcactccagcatcacctgggattacggaaactttgcatgtaaactgtacaagtttgcttacatatttggacagaa tgctacatcttttattttgatcatgatcagcatagaccggtttattgccatcgtgtaccctatggttctgcccagtgtca gtaagaggaacagtcgtatcatgttagctacagcctggatcctcagtttcctggccagcattcctcaagtgacttttcaa ttatcaaagacaggcagctccgtggtcttcttaagaaaggacctaagtatagaatcccatccaagatag |
|
Protein
| Protein ID | pfu_aug2.0_80.1_00200.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_80.1_00200.t1 MIAQNSTITDLVPLAFVSRERSLPTIVVNAVLFVVGFIANLTVFVTLFRNRKSQSRCNRFILHLSFADLAVITIVPPTEI AWHSSITWDYGNFACKLYKFAYIFGQNATSFILIMISIDRFIAIVYPMVLPSVSKRNSRIMLATAWILSFLASIPQVTFQ LSKTGSSVVFLRKDLSIESHPR |
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