Gene
| Gene Model ID | pfu_aug2.0_800.1_01147 |
|---|---|
| Locus | scaffold800.1 : 216219 ... 219915 : - |
| To GenomeBrowser | scaffold800.1:216219..219915 |
| Genes list of scaffold | scaffold800.1 |
| Synonym | pfu_aug1.0_26245.1_19114 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_800.1_01147.t1 | 1 | 1 | Reeler | 26 | 153 | 3.4e-31 | 108.2 | 3.5e-35 | 5.1e-31 | 107.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_800.1_01147.t1 | gi|390337234|ref|XP_789043.2| | PREDICTED: putative defense protein 3 [Strongylocentrotus purpuratus] | 6.0e-23 |
| pfu_aug2.0_800.1_01147.t1 | gi|676453654|ref|XP_009053425.1| | hypothetical protein LOTGIDRAFT_239394 [Lottia gigantea] | 4.0e-22 |
| pfu_aug2.0_800.1_01147.t1 | gi|528481068|ref|XP_005165687.1| | PREDICTED: putative defense protein 3 [Danio rerio] | 9.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_800.1_01147.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_800.1_01147.t1 atgtatacagtgttgtcactactcagtcttgtcaccatgacacatgcattcccagctggcccaccactggaaaggtgtca ggatatgatcccggggcacggaccccaaccccagacaggcgcatccccgtacaccgtcaccatgaacactacgtcatact ccgccaatgacgtcattgaagtgactgtcacagcgacaagtggtaacttcagaggtgtctttgtccaggcccgacctatg tgtggtaacactaatattgccgtgggtactttcaatttggagcagggagaagacaaattgcaacttctggactgcaacgg aaacacagcgagcgctgtagcacacagaaacaatgcagatgtcacaaacaggacgttttactggagagcgccatcccaat ctgtcggacatatctatttcaggagtacatttgtacaaacaagacctgtgttctgggttggtgtccagtctccacgcctc caggaccctacggtgaccagcaccacgtgtcctaccaacaacaacaacggtaactctgctacaagtaggacaccggaagt agtcaccctcataatcatggccatctttctgcgcatgacaaggttgtga |
|
Protein
| Protein ID | pfu_aug2.0_800.1_01147.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_800.1_01147.t1 MYTVLSLLSLVTMTHAFPAGPPLERCQDMIPGHGPQPQTGASPYTVTMNTTSYSANDVIEVTVTATSGNFRGVFVQARPM CGNTNIAVGTFNLEQGEDKLQLLDCNGNTASAVAHRNNADVTNRTFYWRAPSQSVGHIYFRSTFVQTRPVFWVGVQSPRL QDPTVTSTTCPTNNNNGNSATSRTPEVVTLIIMAIFLRMTRL |
|