Gene
| Gene Model ID | pfu_aug2.0_801.1_04581 |
|---|---|
| Locus | scaffold801.1 : 107431 ... 114605 : - |
| To GenomeBrowser | scaffold801.1:107431..114605 |
| Genes list of scaffold | scaffold801.1 |
| Synonym | pfu_aug1.0_19648.1_11244 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_801.1_04581.t2 | 2 | 1 | FSH1 | 10 | 43 | 0.0 | 163.8 | 2.5e-11 | 7.3e-08 | 32.1 |
| pfu_aug2.0_801.1_04581.t2 | 2 | 2 | FSH1 | 44 | 190 | 0.0 | 163.8 | 1.29998e-41 | 3.7e-38 | 131.0 |
Transcript
| Transcript ID | pfu_aug2.0_801.1_04581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_801.1_04581.t1 atgtatgacttttattgcatgaacaagggttttatcaaattgttcttcaatcccaatgcagaaccattttcaattagcca gtcagtagtgcatacaggaagacccatctacatggcacaatcaaattctgggaataaactattgaagatactgtgtttac atggatacaggcaaaatgcacaaagcttcaaagaaaagacaggatcatttcggaagattgtgaagaaacatgcagaattt gtatttataacagcaccgaacagagtacctgctgtagatcaggaagttacacaggatcatcagacacaagataatgatga gagaggatggtggttctctactggagacagatcatataatgctaaggactttacagactgttgtcatggttaccaggaat ctgtggaggtcattaaacaatcattaattgaacagggtccatttgatggaatactagcgtttagtcagggtgcggcaatg ctgagtcttatatgtggtttacagaaacaaaatccagatggaccgtttaagtttgactttgtgatacttgttgccgggtt ccgcagtcgtcaaaaacctcatgatgaattatacagtcagaagttcacagttccatccttacatgtgtttggtgatacag acaaagttatacctaaagatatgtctgaggatctattacagttttatacagacccagttatactacagcatcctggtgga catttcatacctacctccgcaccacagaagtcagcctacacacagttcctggacaattttctacgaaaaaagaatgacga taaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnagatgtttgtaaagtggggagaatgtaatggattattcttcttatttgtgcaggtgaattga |
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| Transcript ID | pfu_aug2.0_801.1_04581.t2 |
| Definition | - |
>pfu_aug2.0_801.1_04581.t2 atggcacaatcaaattctgggaataaactattgaagatactgtgtttacatggatacaggcaaaatgcacaaagcttcaa agaaaagacaggatcatttcggaagattgtgaagaaacatgcagaatttgatgagagaggatggtggttctctactggag acagatcatataatgctaaggactttacagactgttgtcatggttaccaggaatctgtggaggtcattaaacaatcatta attgaacagggtccatttgatggaatactagcgtttagtcagggtgcggcaatgctgagtcttatatgtggtttacagaa acaaaatccagatggaccgtttaagtttgactttgtgatacttgttgccgggttccgcagtcgtcaaaaacctcatgatg aattatacagtcagaagttcacagttccatccttacatgtgtttggtgatacagacaaagttatacctaaagatatgtct gaggatctattacagttttatacagacccagttatactacagcatcctggtggacatttcatacctacctccgcaccaca gaagtcagcctacacacagttcctggacaattttctacgaaaaaagaatgacgataaaagnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagatgtttgtaaagtggggag aatgtaatggattattcttcttatttgtgcaggtgaattga |
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Protein
| Protein ID | pfu_aug2.0_801.1_04581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_801.1_04581.t1 MYDFYCMNKGFIKLFFNPNAEPFSISQSVVHTGRPIYMAQSNSGNKLLKILCLHGYRQNAQSFKEKTGSFRKIVKKHAEF VFITAPNRVPAVDQEVTQDHQTQDNDERGWWFSTGDRSYNAKDFTDCCHGYQESVEVIKQSLIEQGPFDGILAFSQGAAM LSLICGLQKQNPDGPFKFDFVILVAGFRSRQKPHDELYSQKFTVPSLHVFGDTDKVIPKDMSEDLLQFYTDPVILQHPGG HFIPTSAPQKSAYTQFLDNFLRKKNDDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFVKWGECNGLFFLFVQVN |
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| Protein ID | pfu_aug2.0_801.1_04581.t2 |
| Definition | - |
>pfu_aug2.0_801.1_04581.t2 MAQSNSGNKLLKILCLHGYRQNAQSFKEKTGSFRKIVKKHAEFDERGWWFSTGDRSYNAKDFTDCCHGYQESVEVIKQSL IEQGPFDGILAFSQGAAMLSLICGLQKQNPDGPFKFDFVILVAGFRSRQKPHDELYSQKFTVPSLHVFGDTDKVIPKDMS EDLLQFYTDPVILQHPGGHFIPTSAPQKSAYTQFLDNFLRKKNDDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFVKWGECNGLFFLFVQVN |
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