Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_801.1_04587
Locus scaffold801.1 : 201087 ... 212505 : +
To GenomeBrowser scaffold801.1:201087..212505
Genes list of scaffold scaffold801.1
Synonym pfu_aug1.0_5704.1_67305

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_801.1_04587.t1 3 1 MFS_1 21 136 2.1e-15 56.3 3.1e-11 1.6e-07 30.4
pfu_aug2.0_801.1_04587.t1 3 2 MFS_1 200 397 2.1e-15 56.3 3.2e-12 1.6e-08 33.6
pfu_aug2.0_801.1_04587.t1 3 3 MFS_1 388 432 2.1e-15 56.3 0.027 130.0 1.0

Transcript
Transcript IDpfu_aug2.0_801.1_04587.t1
Definition-
>pfu_aug2.0_801.1_04587.t1
atggtgtgtgggccaagctggaccatcctttctcgaccttcagtacattaccaacgtcaactggaccaaggatcgtatta
cttcacatcgggaacaataggttatcttgctggctcgctgtccgcgggaattatattcgataaaatacagaataaagtac
tgctaatcttcctgtctacacttagcatcggtattactacggcggtcataccgtgggtgtctatttttggactgatgata
cctgtcatgatactaagaggggcagcaggaggagtgttagatactagtggaaacgctttgctttctcgtacatggggtac
agacggacggatgttcatgcaggcgttacattttggttttgccctagggggtgctgtttcccctttagccatagcacctt
tcctgattcctgagattgaaagcaactccagccaaatggaaacaacaacagacttggatataggtgtttcaaactacact
acagtaacagtggatatcaactctagtctttcatatgaattggtaactgatacatacaacggtacaaataatggtgatgt
tttaattgacgatagagagtctatattgtacatagggttttccatatcagcagccgtggcattactaagctgtgttccta
tattaataagttttgtacaagctcatagtgccattaaacgagaaaagagggtgaacagaaaggagaagtcagacgaggaa
aaggaagaacagaaggaaaacatgacgcagagtatgaaagttgtcgtggtaattgtattgttgtctatatttgtagcata
ctgtgctgttgaagacacattcatggcatttttgtctacattttgtgtacggcaattgaaatggaccaaagtcaaaggtg
cgttgataacttctgcattctgggcagcctttgctgttggtagattagcagggatagttttggttgttattttctctccc
gttactctgatatttttccatgccactctagaactggtcgctttagccggcatttttgtctcggcttggtttgatgtcca
cataggtatgtggattagcgcccccgtcctaggctacgcaatgtcgatcatatttccgagcgtgtttacatggacggagg
aatctttcttacctgtcacgggtttcatatcgtctcttttcttggttggcgccacagcaggctcctcagtcaatcctcta
attctgggtcagataatggagaagtactccgacatgtggtttatatacctattgacgggggaggcggtattactatatac
tgtcatagttatagcttatgttttatctaaaaatatagttaagccgaatcaggcctttcaagatgttaagattgaaatta
gatctgaaactgatgaagacgatcataggagtataattgacgattgtgatatacatgtaaatgttgaaagcgaaaggttg
tga

Protein
Protein IDpfu_aug2.0_801.1_04587.t1
Definition-
>pfu_aug2.0_801.1_04587.t1
MVCGPSWTILSRPSVHYQRQLDQGSYYFTSGTIGYLAGSLSAGIIFDKIQNKVLLIFLSTLSIGITTAVIPWVSIFGLMI
PVMILRGAAGGVLDTSGNALLSRTWGTDGRMFMQALHFGFALGGAVSPLAIAPFLIPEIESNSSQMETTTDLDIGVSNYT
TVTVDINSSLSYELVTDTYNGTNNGDVLIDDRESILYIGFSISAAVALLSCVPILISFVQAHSAIKREKRVNRKEKSDEE
KEEQKENMTQSMKVVVVIVLLSIFVAYCAVEDTFMAFLSTFCVRQLKWTKVKGALITSAFWAAFAVGRLAGIVLVVIFSP
VTLIFFHATLELVALAGIFVSAWFDVHIGMWISAPVLGYAMSIIFPSVFTWTEESFLPVTGFISSLFLVGATAGSSVNPL
ILGQIMEKYSDMWFIYLLTGEAVLLYTVIVIAYVLSKNIVKPNQAFQDVKIEIRSETDEDDHRSIIDDCDIHVNVESERL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495