Gene
| Gene Model ID | pfu_aug2.0_8016.1_22857 |
|---|---|
| Locus | scaffold8016.1 : 1 ... 6365 : - |
| To GenomeBrowser | scaffold8016.1:1..6365 |
| Genes list of scaffold | scaffold8016.1 |
| Synonym | pfu_aug1.0_7496.1_31397 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein phosphatase non-receptor type 21-like | GO:0001946 GO:0016311 GO:0016791 GO:0043229 GO:0050794 GO:0097659 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8016.1_22857.t1 | 1 | 1 | FERM_N | 23 | 69 | 5.8e-07 | 29.4 | 2.2e-10 | 1.6e-06 | 28.0 |
| pfu_aug2.0_8016.1_22857.t1 | 2 | 1 | FERM_M | 75 | 188 | 2.2e-21 | 76.3 | 4.6e-24 | 3.4e-20 | 72.4 |
| pfu_aug2.0_8016.1_22857.t1 | 2 | 2 | FERM_M | 192 | 213 | 2.2e-21 | 76.3 | 0.023 | 170.0 | 2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8016.1_22857.t1 | gi|524891035|ref|XP_005102056.1| | PREDICTED: tyrosine-protein phosphatase non-receptor type 21-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_8016.1_22857.t1 | gi|260830489|ref|XP_002610193.1| | hypothetical protein BRAFLDRAFT_216945 [Branchiostoma floridae] | 2.8026e-45 |
| pfu_aug2.0_8016.1_22857.t1 | gi|26352097|dbj|BAC39685.1| | unnamed protein product [Mus musculus] | 6.0e-39 |
| pfu_aug2.0_8016.1_22857.t1 | gi|148681080|gb|EDL13027.1| | protein tyrosine phosphatase, non-receptor type 14, isoform CRA_c, partial [Mus musculus] | 7.0e-38 |
| pfu_aug2.0_8016.1_22857.t1 | gi|637257421|ref|XP_008124052.1| | PREDICTED: tyrosine-protein phosphatase non-receptor type 14 [Anolis carolinensis] | 9.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_8016.1_22857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8016.1_22857.t1 atgatctgggattttgacaaccaaggcgttttggaaggatcgatccaaaagaacttcacaaggatgacccagtactttgg cctgcggtatgtgaccaagaagatgcagtaccattgggtggacctgacaaagcccttgaagaaacaactagataagacag cccaaccctcctccaccccacgggtttactttggtgtcatgctttacgtgtctggggctcatagaatcatggatgaatca gccagataccagtatttcctacaactgaagaatgacattgtggagggtagaattccgatgagccatgaccaagtgctacg cttggctgcctttagtttacaagctgagtttggagattatgactatgatagagtaccagaggagtatttccaggacaacc ctctctttcccaagatgatgtgtcgagatgagaatgtgctgcagcagctaatgaatgaagctttaagtgccttcataagt ctacaaggcgttaactctgttaaagctgaagtacagtatattaaggaaatacagatgatggatggttatgggatggagta ctacactgctaagggtgtgaactatgttaaagctgaagtacagtatgttaaggaaatacagatgatggatggttacggaa t |
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Protein
| Protein ID | pfu_aug2.0_8016.1_22857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8016.1_22857.t1 MIWDFDNQGVLEGSIQKNFTRMTQYFGLRYVTKKMQYHWVDLTKPLKKQLDKTAQPSSTPRVYFGVMLYVSGAHRIMDES ARYQYFLQLKNDIVEGRIPMSHDQVLRLAAFSLQAEFGDYDYDRVPEEYFQDNPLFPKMMCRDENVLQQLMNEALSAFIS LQGVNSVKAEVQYIKEIQMMDGYGMEYYTAKGVNYVKAEVQYVKEIQMMDGYG |
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