Gene
| Gene Model ID | pfu_aug2.0_802.1_07907 |
|---|---|
| Locus | scaffold802.1 : 201057 ... 207051 : + |
| To GenomeBrowser | scaffold802.1:201057..207051 |
| Genes list of scaffold | scaffold802.1 |
| Synonym | pfu_aug1.0_2745.1_15921 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_802.1_07907.t1 | 2 | 1 | RVT_1 | 439 | 466 | 5.1e-21 | 75.0 | 0.38 | 940.0 | -1.1 |
| pfu_aug2.0_802.1_07907.t1 | 2 | 2 | RVT_1 | 636 | 796 | 5.1e-21 | 75.0 | 3.7e-24 | 9.2e-21 | 74.1 |
| pfu_aug2.0_802.1_07907.t1 | 2 | 1 | rve | 1016 | 1031 | 1.3e-06 | 28.4 | 1.1 | 2700.0 | -1.6 |
| pfu_aug2.0_802.1_07907.t1 | 2 | 2 | rve | 1041 | 1072 | 1.3e-06 | 28.4 | 3.2e-09 | 7.9e-06 | 25.9 |
Transcript
| Transcript ID | pfu_aug2.0_802.1_07907.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_802.1_07907.t1 atgagtccgccaatagaaggaatttgtaagggctctgcagagagtatggatatgcggaaaatattggggaactgtccaat tataataaataacaatgaacattctctatccacaaattttcggccactcggcctttatcaagtggaaaagcacnttatat attcgcatcttgaaggtgaagcaaaagatgaaataaaattccgtacagatatacgacatgatccagaggcaatactcgaa tgtttacaaactgcatttggtgatccagatagtgtaactgttttacagcagcgattctttgagcgtcatcagagggatac agaaacaatacgtcaatattcgtacgttttactagacttgtttcaaaaagtcagaaaaaaggatgatagcgtttttccta acaaggagcgtacattgtgtgaacaatttgcaaacagcctatctgatccattcataaggaaggagatgaaacgtttagta cgtagtaatcctggcatggaattttttgatctccgaaatgaagctatattactgagcgaggaagaggagaacagtgtgag cgttcgaaaggtggatttaaatgacaagcctggtgaaacgagcagtatgtgcagcgaatcacaaaatgtaaagcccaaat ccgatgatcattcaggtatatcgtctaacgtggaacaactattaaaagtcgttgaagcgcaacaaaagcagattgattca ctcacgacattgatgaaggatcaaagtttgaataaacagtacactccacgctggaattacgatcaagtcccacgctggaa ttacgatcaagccctacgctggaataacgatcaaaggaaatgctacaaatgtaatcgcacagtggatacgggatctatgg tatcgacacttaccgagtctttttaccgaaaatgtattgaaccagttggccttactatgaagtcggactgcactataaca ttgaaagctgtgaatggattgaatataccttatgtcggttatgtggagctagatatacgttgtgcagggaaattgtttga gaaaagaggattcctgatcgtaaaagattccgtagatcaatgtacgcggaaacgcaaagaagtagttcctggaataatcg gaatgaacatcatcaacgaatgtaggaatattttattatcaagtgacttaccgtcaaatggctttttaacagaaattttt aaatcgattgatagagagggaaggaagtcaactattcgagtggcaagagttaacggtacttcgtcagtacacattccagg gaataccgtagtcgttattcagtgcactgcccctcacgtagatcacgatgttttgatcgagccgttaaccaatgtatcgc atttacatagacacttgaaaatcgtgcgcactttcgcgcatattgaaagaggatgcgtatttatcagagttgccaatgtt ggtgatgaggatatatatgtcaagcctaggacatggataggggtgatctcaaaatgcgaaacagagcagaaatctgatgt catgtttgaacattcatatgttggtagttcggaggagatatttattagtcagcaatgtaaagtatccgaaatgagtacag gggtggatccaaattttcatttaccagaggatgtttacagactgaattgtacaaaggaagaaaaggatcttataacgaac tgtttccagaaacacagtgatgttttctccaaagatgatgatgatattggccatacgagtaccgttacgcatagaattac ccttacagataatcagcctatttctcagccatatcgtcgcattccaccgtcgcaatttaaggaagtgaagttacatattc gtaagctgttagacaataaaatcatcagagaaagtaccagcccattcgctgctccgatcggtctagtacgtaaaaaggac aattcgttgaggctatgcgtcgattatcgtaaattaaatgccaatactgtcaaggacaaatttccgttatctcgtctcga agaaacatttgacgcattacatgggtccgttatgttttcaacgatggacttaacagccggctataaccagattgaggtcg cttgtgatgacaaggagaaaacagcatttacaactccgtttgggcattatgagtttgacagaatgccatttgggcttacg aacgcccctgcgacatttcagaggttaatgcaacattgttttcgatatgaagttttcaataccttactcgtatttttgga tgacatcattgtttattccaagacactggaggagcatatacaacgactcgataaagtatttaccattttgagaaagtatg gactgaaattaaagatgcgtaaatgtagtttcttccatcaatctgtgaaatatattggtcacgtggttagcaaggatgga atttccaccgacaatgacaagatcgagtgcataagaaactggaaaataccggaaacgagtaaagaagtaaagtctttcct gggttttgccgggtattaccggagatttatacgcaacttttcgcaaattgcggagccattattggaaatttcgaaatata acttaaagcacccgaaaacaaaatttggagacaagtggaccgaaaaatgtcaaaaatcgtttgatcaactgagagatgtg ttgacgtctgcaccgctacttggatatgcagattttacgattccgtttatcgtggagacagacgcgtgtgcgaatggcct tggcacagtactttcccaaatacagaatggacgaactgttacgaccaaacgagaaagctgcaaagaatatgagaagatat gtgatccgaaacttggagatttaaaacagcttttgcttccggaatgcttgaaagaagccgtactacaaagtttacatgat ggaaatggtcatcaaggaattgaaaggacattcagtttagtcagagagagatgttattggccgaaaatgttcgaagatgt aaagacttattgtaaaaaatgcgaaaggtgtgcaatagccaagactccgcctccgaaagtacataccagcatgggacact tgtcggcgacagaaccgttagaattagttgctgttgattttaccgtattggagcgacctcaaggattagagaatgttttg ctctgtaaaatttataacaccaagaagtcgaggacgaccgcatatcatccccaaggaaacggtcaatgcgaacgcttcaa tcggactttgcatgacttactgcgttcgttgtcacctgcgaggaaaaggaagtggccggaatatatcaaggagttggtat tttcctacaacgttacacctcatgcgtccactggatactcaccgttttttctaatgtacggacgacagccgaatttaccc gttgattttctgcttggacggaattctgatgaaaatgacgtcgatatcgatattgatcgatgggtcgagttacacacgga acagttaagttttgcatacaagtgtgccgtacaggaatcgcgtaaaaacgaaaaacagccgagcaattacacgattccgg gaagtcagaaaacgaattttntggatactcaccgttttttctaa |
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Protein
| Protein ID | pfu_aug2.0_802.1_07907.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_802.1_07907.t1 MSPPIEGICKGSAESMDMRKILGNCPIIINNNEHSLSTNFRPLGLYQVEKHXIYSHLEGEAKDEIKFRTDIRHDPEAILE CLQTAFGDPDSVTVLQQRFFERHQRDTETIRQYSYVLLDLFQKVRKKDDSVFPNKERTLCEQFANSLSDPFIRKEMKRLV RSNPGMEFFDLRNEAILLSEEEENSVSVRKVDLNDKPGETSSMCSESQNVKPKSDDHSGISSNVEQLLKVVEAQQKQIDS LTTLMKDQSLNKQYTPRWNYDQVPRWNYDQALRWNNDQRKCYKCNRTVDTGSMVSTLTESFYRKCIEPVGLTMKSDCTIT LKAVNGLNIPYVGYVELDIRCAGKLFEKRGFLIVKDSVDQCTRKRKEVVPGIIGMNIINECRNILLSSDLPSNGFLTEIF KSIDREGRKSTIRVARVNGTSSVHIPGNTVVVIQCTAPHVDHDVLIEPLTNVSHLHRHLKIVRTFAHIERGCVFIRVANV GDEDIYVKPRTWIGVISKCETEQKSDVMFEHSYVGSSEEIFISQQCKVSEMSTGVDPNFHLPEDVYRLNCTKEEKDLITN CFQKHSDVFSKDDDDIGHTSTVTHRITLTDNQPISQPYRRIPPSQFKEVKLHIRKLLDNKIIRESTSPFAAPIGLVRKKD NSLRLCVDYRKLNANTVKDKFPLSRLEETFDALHGSVMFSTMDLTAGYNQIEVACDDKEKTAFTTPFGHYEFDRMPFGLT NAPATFQRLMQHCFRYEVFNTLLVFLDDIIVYSKTLEEHIQRLDKVFTILRKYGLKLKMRKCSFFHQSVKYIGHVVSKDG ISTDNDKIECIRNWKIPETSKEVKSFLGFAGYYRRFIRNFSQIAEPLLEISKYNLKHPKTKFGDKWTEKCQKSFDQLRDV LTSAPLLGYADFTIPFIVETDACANGLGTVLSQIQNGRTVTTKRESCKEYEKICDPKLGDLKQLLLPECLKEAVLQSLHD GNGHQGIERTFSLVRERCYWPKMFEDVKTYCKKCERCAIAKTPPPKVHTSMGHLSATEPLELVAVDFTVLERPQGLENVL LCKIYNTKKSRTTAYHPQGNGQCERFNRTLHDLLRSLSPARKRKWPEYIKELVFSYNVTPHASTGYSPFFLMYGRQPNLP VDFLLGRNSDENDVDIDIDRWVELHTEQLSFAYKCAVQESRKNEKQPSNYTIPGSQKTNFXDTHRFF |
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