Gene
| Gene Model ID | pfu_aug2.0_803.1_11194 |
|---|---|
| Locus | scaffold803.1 : 176455 ... 186635 : + |
| To GenomeBrowser | scaffold803.1:176455..186635 |
| Genes list of scaffold | scaffold803.1 |
| Synonym | pfu_aug1.0_6055.1_52691 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_803.1_11194.t1 | 2 | 1 | Tropomodulin | 13 | 145 | 7.29936e-42 | 142.3 | 1.4013e-45 | 7.29936e-42 | 142.3 |
| pfu_aug2.0_803.1_11194.t1 | 2 | 2 | Tropomodulin | 203 | 236 | 7.29936e-42 | 142.3 | 0.081 | 600.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_803.1_11194.t1 | gi|676457360|ref|XP_009054624.1| | hypothetical protein LOTGIDRAFT_227355 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_803.1_11194.t1 | gi|524889683|ref|XP_005101396.1| | PREDICTED: tropomodulin-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_803.1_11194.t1 | gi|684397011|ref|XP_009171711.1| | hypothetical protein T265_07818 [Opisthorchis viverrini] | 0.0 |
| pfu_aug2.0_803.1_11194.t1 | gi|291222462|ref|XP_002731235.1| | PREDICTED: tropomodulin-1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_803.1_11194.t1 | gi|675864690|ref|XP_009017905.1| | hypothetical protein HELRODRAFT_111897 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_803.1_11194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_803.1_11194.t1 atggagaaatcagccctgaaacccgtccatgatgtacctgatatagacatagacgacatagacaaactcctgtctgaact gtcagccgaggaaatagaagaactcaatggagacttcgaccctgataactccttgctgccaccaagccagaggatgaagg accagacaaagaaaaatcctacagggccgtttcagcgtaaaaaactaatggaatttctggaacggaaagcaaaggaagag aaagactgggaacagaataaacctttcgttaaagaaatcagaggaaaagtatggaagcctaaagaggaaccaaaagcgaa gattaacgatgatgagagcgttgatactgaatgggacgcaattctaaatgaagcttcagaggaggaacttgtcgatttgg ctgccgtgcttggatttcatggaatgctgaatcaaacacagtactatgccggtcttgataacgtcaaactagaggatggc ggcggattcacaggcgttgccaaagctcaagaactgctcaaaatgccggaggaacccccaaataatacggacgtagagga gagtataaagagaatcaatgacaacgatcccgcacttaaacatcttaaccttaataatattaagaatatatccttagaga gattaatagaggttgtgagtggtttgaagacaaatacaaatcttgaaatcctggaaatggcaagtgtcaaaatgacagac aaggtagcaaaggctgtaaataaaaataaaactcttacagaactacgagttgctaaccagaaaccagaggttctcggaaa caaggtagaaatgcagctgttgaaactgatccaacagaatgacacattattgaaattaggcattgcattagaattccccg acgctcgtgttaggattcacgaaaaattacaagacaacaatgatcttttgaggaagaaaagagttggagacccgaaagat taa |
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Protein
| Protein ID | pfu_aug2.0_803.1_11194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_803.1_11194.t1 MEKSALKPVHDVPDIDIDDIDKLLSELSAEEIEELNGDFDPDNSLLPPSQRMKDQTKKNPTGPFQRKKLMEFLERKAKEE KDWEQNKPFVKEIRGKVWKPKEEPKAKINDDESVDTEWDAILNEASEEELVDLAAVLGFHGMLNQTQYYAGLDNVKLEDG GGFTGVAKAQELLKMPEEPPNNTDVEESIKRINDNDPALKHLNLNNIKNISLERLIEVVSGLKTNTNLEILEMASVKMTD KVAKAVNKNKTLTELRVANQKPEVLGNKVEMQLLKLIQQNDTLLKLGIALEFPDARVRIHEKLQDNNDLLRKKRVGDPKD |
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