Gene
| Gene Model ID | pfu_aug2.0_805.1_17846 |
|---|---|
| Locus | scaffold805.1 : 50223 ... 104005 : - |
| To GenomeBrowser | scaffold805.1:50223..104005 |
| Genes list of scaffold | scaffold805.1 |
| Synonym | pfu_aug1.0_4772.1_59600 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| spectrin beta non-erythrocytic 5-like | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_805.1_17846.t1 | 5 | 1 | CH | 26 | 126 | 3.7e-37 | 126.6 | 5.7e-19 | 1.2e-15 | 57.4 |
| pfu_aug2.0_805.1_17846.t1 | 3 | 1 | CAMSAP_CH | 43 | 62 | 2.8e-07 | 30.0 | 0.007 | 15.0 | 5.3 |
| pfu_aug2.0_805.1_17846.t1 | 3 | 2 | CAMSAP_CH | 149 | 215 | 2.8e-07 | 30.0 | 9.8e-08 | 0.00021 | 20.8 |
| pfu_aug2.0_805.1_17846.t1 | 5 | 2 | CH | 151 | 236 | 3.7e-37 | 126.6 | 1.6e-19 | 3.4e-16 | 59.2 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 1 | Spectrin | 264 | 370 | 0.0 | 397.3 | 1.1e-10 | 2.4e-07 | 30.9 |
| pfu_aug2.0_805.1_17846.t1 | 5 | 3 | CH | 272 | 290 | 3.7e-37 | 126.6 | 3.2 | 6900.0 | -2.9 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 2 | Spectrin | 382 | 432 | 0.0 | 397.3 | 1.6e-09 | 3.4e-06 | 27.2 |
| pfu_aug2.0_805.1_17846.t1 | 5 | 4 | CH | 421 | 482 | 3.7e-37 | 126.6 | 0.036 | 76.0 | 3.4 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 3 | Spectrin | 437 | 528 | 0.0 | 397.3 | 8.2e-14 | 1.7e-10 | 41.0 |
| pfu_aug2.0_805.1_17846.t1 | 3 | 3 | CAMSAP_CH | 439 | 459 | 2.8e-07 | 30.0 | 5.6 | 12000.0 | -4.0 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 4 | Spectrin | 535 | 631 | 0.0 | 397.3 | 3.4e-22 | 7.3e-19 | 68.0 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 5 | Spectrin | 635 | 703 | 0.0 | 397.3 | 2.3e-16 | 4.9e-13 | 49.2 |
| pfu_aug2.0_805.1_17846.t1 | 1 | 1 | SH3_1 | 762 | 805 | 1.2e-07 | 30.9 | 1.5e-10 | 3.1e-07 | 29.6 |
| pfu_aug2.0_805.1_17846.t1 | 1 | 1 | SH3_9 | 763 | 809 | 2.3e-10 | 39.8 | 2.1e-13 | 4.4e-10 | 38.9 |
| pfu_aug2.0_805.1_17846.t1 | 1 | 1 | SH3_2 | 768 | 811 | 9.0e-06 | 25.0 | 8.8e-09 | 1.9e-05 | 24.0 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 6 | Spectrin | 837 | 898 | 0.0 | 397.3 | 0.00015 | 0.33 | 11.2 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 7 | Spectrin | 901 | 1001 | 0.0 | 397.3 | 1.5e-21 | 3.1e-18 | 65.9 |
| pfu_aug2.0_805.1_17846.t1 | 5 | 5 | CH | 932 | 970 | 3.7e-37 | 126.6 | 0.49 | 1000.0 | -0.3 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 8 | Spectrin | 1006 | 1107 | 0.0 | 397.3 | 8.6e-21 | 1.8e-17 | 63.5 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 9 | Spectrin | 1110 | 1213 | 0.0 | 397.3 | 1.5e-18 | 3.1e-15 | 56.3 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 10 | Spectrin | 1215 | 1244 | 0.0 | 397.3 | 0.11 | 230.0 | 2.1 |
| pfu_aug2.0_805.1_17846.t1 | 11 | 11 | Spectrin | 1246 | 1287 | 0.0 | 397.3 | 1.4e-08 | 3.0e-05 | 24.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_805.1_17846.t1 | gi|291224819|ref|XP_002732400.1| | PREDICTED: spectrin beta chain, non-erythrocytic 5-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_805.1_17846.t1 | gi|755978406|ref|XP_011308574.1| | PREDICTED: spectrin beta chain, non-erythrocytic 5 isoform X3 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_805.1_17846.t1 | gi|755978403|ref|XP_011308573.1| | PREDICTED: spectrin beta chain, non-erythrocytic 5 isoform X2 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_805.1_17846.t1 | gi|755978400|ref|XP_011308572.1| | PREDICTED: spectrin beta chain, non-erythrocytic 5 isoform X1 [Fopius arisanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_805.1_17846.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_805.1_17846.t1 atgtcggtgaaagacgtgcataattttgagaagggccgtattaaggcccttcaagaggaacgagtctacattcagaaaaa gaccttcacaaaatgggcaaacgctttcctggaaaaggcccgtctggagatcaaggaccttttcacagacttggcagatg gacggattctgatgaaactattggaaattatttcgggtgaaaacctagggaaaccaaaccgaggaaagatgagagtgcac atggttgaaaactgcagtcgctgtctgaaatttcttgcaaccaaggtgtactttgagaacatcggagctgaagatattgt agatggtaatcctcgtctgatactgggtctgatatggacaattattctgagattccagatccaagaaatagagatagaag tggtgagtactgccaatcataagctatacatgtctgatactggatatccaggggtgaacatcactaattttaccaacagc tggagaaacggactgggattcaatgctcttatacatgctcacagaccagatttaatagactatgagagattacacccaga ggaccacattggtaaccttaacaatgccttcaatgtggcggccaatgaacttggaatacctaaaatcctggatgcagagg atgtggacgttacacggccggacgagaaggtcattatcacttacgtagcctcatattatcattactttgccaagatgaag agtgagatgacaggaggcaagaggattgccaagattgtcggcatgatgaaggacattgaaaacatggtagataattatga aacactaacgtccagtttactcgagtggatcagaactaaaataggggagctcaacgatagggaattcccaaactcactag agggcgtacagaaactactcggtcgatttaaagaatacatcacaaaggaaaaaccacctaaatatcgagaaagaggaaat atagaagcccagttttttaacattcaggccaaacttaaagctaatggacagaaactttacacaccaccggagggtcagtt aatacatgacatagagagtgcatggttacgactggaaaaagctgaacatgagagagaagtggctctcaggggacgaaatg atcagggaatagaaaagcattatgagaaagatagattccgtgccttaaacagtttggccaaggaacttgtagagggaaat tatcatgcaagggagcaagtgaaaaaaaaggatgaagatataatgagaaaatggaaagaattattggaaaaattagagag gagaaaaaccacattatcaggatacaaaaactaccttacaatgttcagagaaatagagaacatacaggaggaattgaaag aagtagagtctaagttgaaaacccaggactacggcaaacatctacaagcggtggacgatttccttgaacaacatagcttg atagagacacagttacatgcccttggcaagcgtgtcagaaacctaaataggcgatcaaagcaaatagacccaagtcatca ggaaggtggcgtacttgagaaaagacttgatgatctaaataaagattatgacagcctagagggcacagtttttattggat cttncgctgaggaggaagagagatgggcccaggagagaattgatctatgtcgatctacgttcactggaaaagatctcaat gcagccctcatgttactgaaaaaacacgaggctcttgaggcagagatgcatggtagaaagccatggtgtgaccagatctg tgctaacggtcaagaccttgttaacagtggtcatgagggacgggcagagataggcaccaagatcaacagtctgatggaca agtggaaattactgaaggaactggctgatgctcgcaggactaaattagaggatggaatagaggctcatcagtattatgct gatgctactgaagccgaatcatggatgaaggaaaaaatgccgctggtaacgagtgacgactacggcagagatgaaatggg atctcaggctttactttcgaggcacaacagattggaaggagaaatccgaagttttcgcactgaaattaaacgcttggatg aacttgctcaacttatgacaaaagctgcaagtgaacacaatatatcacctgagaagtttcggcctcaggagaacggtgag gcatcagatgaagaggagtttgtagaggaggtcgtggaggtgccccatgaggtggaggtagaggagatcagggagagaga ggtcatacaggatgtcgtggaaaccaggaagattcctcaggtcaaggccatgtacccatacaaaggtcaaggcatgaaag tggaaaaaggagagataatgttgttggtacagcgaacaaactccgactggtggcaggtccgcaaaactgacggtacagag ggatttgttcccgctaactatgtcaaggaagtggaccccaaggtcacacagaaggtcatacacagaccaacaaaggtccc agaaaaggtcaaggtcaagaaaaccgtcatgaagaaggaggtagtgaagaagaagaaggagaaggcaagcaagctccgga gagctccctctgttcgttccaaagccaatctccattttgacaaagataatgtagacaaaaggcagaagcaagtgaaccta acatacaacaaattagtcaaattagcccaggccagacgtatagcactagaagatgccgtcagattgtttaaattttacag agaatgtgatgaatttgaagcctggatgaaagaaaaggagctgattctgacaaataaagaaagtctgacagacaatatgg aagctgtcaagaagaaatttgagaacttaatgacaagtttggctgctaacaaaggtagactggatgagattaacagcctg gcagaggatatagtcaagtctggaagtggtcagaaagatcaagtcaagaagaggcaaaaagacattaatgacagatggaa cagactaatgaagctgaagatggacaaagagaagaatcttcagggagcctctagtattgagttgttccagtctacatgtg acgagttggcagattggataaaggagaaggacaatgctttagaccttgatgaatacggaaaagatgttaaaggcattgag gctttacagagaaaacatgctaatctacaaagagagttggtaccagtggaggaaaagatgaacagaatgaacttcctggc tgattcagtacgatcagcttaccctgatgagaagaactacgttgatcagagacagaaagaactgcaggatttatgggact cactcaagaacaaggcagatgagaagaagaagagattggacaattctcatgagctgcagaaattcaacaatgatgccaaa gacttgaacgcctgggcaggagccactaaggctaagctagccagtgctgagattcctcgtgatgttcagatggcagaaca aatgatgaaagaacatgaagacctcaaggacgacatcgatactcataaacccaaatttgagaacattcgcgcccttggtg ccagcatccttggtaaggaccctaaagctcaagatgttaaagacatgctccacaaactggatgaggatgagagggcaata gatgacatgtggaaaaacaggaacaaacagttacaggacgcttacgatctacagacattcaacagggacgctgataatgt cgactctgtcaccaagagtcatgagaaattcctagaatttgctgatgtcgggaaaggacaaggtatgatagatgatggtc accaggcctcaccggaggttaaaactatactaggtaaccttaatacacagtggaaggaccttacagagaaggctgaggat agagggaacaaactacggcaagctacggcacagcacaccctcaacaaggcattggctgacgcacaggtaggaattagtac atatggttcatatacagtgtacacatacatgtacatatacatgtgtaactacatgtactcgcacatttatctccaatgta cattgagataa |
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Protein
| Protein ID | pfu_aug2.0_805.1_17846.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_805.1_17846.t1 MSVKDVHNFEKGRIKALQEERVYIQKKTFTKWANAFLEKARLEIKDLFTDLADGRILMKLLEIISGENLGKPNRGKMRVH MVENCSRCLKFLATKVYFENIGAEDIVDGNPRLILGLIWTIILRFQIQEIEIEVVSTANHKLYMSDTGYPGVNITNFTNS WRNGLGFNALIHAHRPDLIDYERLHPEDHIGNLNNAFNVAANELGIPKILDAEDVDVTRPDEKVIITYVASYYHYFAKMK SEMTGGKRIAKIVGMMKDIENMVDNYETLTSSLLEWIRTKIGELNDREFPNSLEGVQKLLGRFKEYITKEKPPKYRERGN IEAQFFNIQAKLKANGQKLYTPPEGQLIHDIESAWLRLEKAEHEREVALRGRNDQGIEKHYEKDRFRALNSLAKELVEGN YHAREQVKKKDEDIMRKWKELLEKLERRKTTLSGYKNYLTMFREIENIQEELKEVESKLKTQDYGKHLQAVDDFLEQHSL IETQLHALGKRVRNLNRRSKQIDPSHQEGGVLEKRLDDLNKDYDSLEGTVFIGSXAEEEERWAQERIDLCRSTFTGKDLN AALMLLKKHEALEAEMHGRKPWCDQICANGQDLVNSGHEGRAEIGTKINSLMDKWKLLKELADARRTKLEDGIEAHQYYA DATEAESWMKEKMPLVTSDDYGRDEMGSQALLSRHNRLEGEIRSFRTEIKRLDELAQLMTKAASEHNISPEKFRPQENGE ASDEEEFVEEVVEVPHEVEVEEIREREVIQDVVETRKIPQVKAMYPYKGQGMKVEKGEIMLLVQRTNSDWWQVRKTDGTE GFVPANYVKEVDPKVTQKVIHRPTKVPEKVKVKKTVMKKEVVKKKKEKASKLRRAPSVRSKANLHFDKDNVDKRQKQVNL TYNKLVKLAQARRIALEDAVRLFKFYRECDEFEAWMKEKELILTNKESLTDNMEAVKKKFENLMTSLAANKGRLDEINSL AEDIVKSGSGQKDQVKKRQKDINDRWNRLMKLKMDKEKNLQGASSIELFQSTCDELADWIKEKDNALDLDEYGKDVKGIE ALQRKHANLQRELVPVEEKMNRMNFLADSVRSAYPDEKNYVDQRQKELQDLWDSLKNKADEKKKRLDNSHELQKFNNDAK DLNAWAGATKAKLASAEIPRDVQMAEQMMKEHEDLKDDIDTHKPKFENIRALGASILGKDPKAQDVKDMLHKLDEDERAI DDMWKNRNKQLQDAYDLQTFNRDADNVDSVTKSHEKFLEFADVGKGQGMIDDGHQASPEVKTILGNLNTQWKDLTEKAED RGNKLRQATAQHTLNKALADAQVGISTYGSYTVYTYMYIYMCNYMYSHIYLQCTLR |
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