Gene
| Gene Model ID | pfu_aug2.0_807.1_24420 |
|---|---|
| Locus | scaffold807.1 : 17119 ... 24685 : - |
| To GenomeBrowser | scaffold807.1:17119..24685 |
| Genes list of scaffold | scaffold807.1 |
| Synonym | pfu_aug1.0_6992.1_09470 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_807.1_24420.t1 | 2 | 1 | Fibrinogen_C | 27 | 98 | 1.6e-09 | 37.7 | 1.4e-08 | 7.1e-05 | 22.5 |
| pfu_aug2.0_807.1_24420.t1 | 2 | 2 | Fibrinogen_C | 117 | 153 | 1.6e-09 | 37.7 | 5.4e-06 | 0.026 | 14.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_807.1_24420.t1 | gi|260821772|ref|XP_002606277.1| | hypothetical protein BRAFLDRAFT_67516 [Branchiostoma floridae] | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_807.1_24420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_807.1_24420.t1 atggagtcgaaacctacactttacgttattcttagcatgcgcagtatgttagttggagttgtcatccttgccgctaacgg gaataagaacctacacatcgttactcgagggcaancttctttaactcgaggtaggaactgtacgttaaatatggtcaaca tggataacgtaacaagatatgtaacctacacagactttaaaatcgaaagtgaagcagacaattacagacttagaatagga aactcttcagggaatgttgggaataagaacctacacatcgtaactcgagggaataagaacctacacatcgtatctcgagg gaataagaacctatatatcgtatctcgagggaataagaacctacacatcgtaactcgaggtaggaactgtacgcttctga tagacatgatcaacgtggataacataacaagatatgccacctacacagactttaaaatctaa |
|
Protein
| Protein ID | pfu_aug2.0_807.1_24420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_807.1_24420.t1 MESKPTLYVILSMRSMLVGVVILAANGNKNLHIVTRGQXSLTRGRNCTLNMVNMDNVTRYVTYTDFKIESEADNYRLRIG NSSGNVGNKNLHIVTRGNKNLHIVSRGNKNLYIVSRGNKNLHIVTRGRNCTLLIDMINVDNITRYATYTDFKI |
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