Gene
| Gene Model ID | pfu_aug2.0_807.1_24426 |
|---|---|
| Locus | scaffold807.1 : 160057 ... 196102 : - |
| To GenomeBrowser | scaffold807.1:160057..196102 |
| Genes list of scaffold | scaffold807.1 |
| Synonym | pfu_aug1.0_11023.1_60846 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myotubularin-related protein partial | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_807.1_24426.t1 | 2 | 1 | Myotub-related | 259 | 620 | 0.0 | 430.7 | 0.0 | 0.0 | 430.7 |
| pfu_aug2.0_807.1_24426.t1 | 2 | 2 | Myotub-related | 807 | 872 | 0.0 | 430.7 | 0.94 | 3500.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_807.1_24426.t1 | gi|676488409|ref|XP_009064607.1| | hypothetical protein LOTGIDRAFT_81473, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_807.1_24426.t1 | gi|260803685|ref|XP_002596720.1| | hypothetical protein BRAFLDRAFT_219160 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_807.1_24426.t1 | gi|542180288|ref|XP_005496128.1| | PREDICTED: myotubularin-related protein 3-like, partial [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_807.1_24426.t1 | gi|675622265|ref|XP_008939244.1| | PREDICTED: myotubularin-related protein 3, partial [Merops nubicus] | 0.0 |
| pfu_aug2.0_807.1_24426.t1 | gi|530564588|ref|XP_005278871.1| | PREDICTED: myotubularin-related protein 3 isoform X5 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_807.1_24426.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_807.1_24426.t1 atgaaggataaaaattcaaacagctggtttatctatgccgcaaaaacgctagaaaaatatgatctcccatcaatatatga cctacttgaggatccagtcggtaaagaaaagtggaaacaaatagtaaagtcggcagttaacgcaaaatggataggaacaa ttaaattacaagcgaaaggaaaatcttcaatgaaacacatcggtgacgatcagtacaaagcaagaagagttcatttcata tggcaagatgtcagtgatgatacattggcagtcgagaaggcaggaataaaggccaagctaataagtgggggctataccaa cttcaggaaaatatatataaacagaacaaaaaaagggagaaggctctgtgcaaactctgtaatcaagaagatgaggacat ttatcatttcatactgcgctgtgctgagtgaggtcaggaaaaacttcatggaaaaggcatacgctgacgagcctgccagt ttggagtgcatcaataaatccgacttattcccaaagaagacccttgtcagcgaagacgccagtctccaagtcccgttccc gctgctgagtggggaggcagtggaatatctagggcggacctcagatggagtcatcgccctgtccaatttccgcctgctga cacggtgtaaggattcctttgtaaacctaccgctgggtttggtggagctagtggaaaacagagacatcttctatctccat ataacgtgcaaagacgccactgtcgtaagatctaataatttattattatcgaacaatgacaatgtaaagtacagctttgg caaagaagttgacagactgaagtttgacttgaagagtaccaaagcttggaggatcacatatattaatgaagaatttggtg ttagtcccacatatcccaagaaccacatagtaccatctgccatatcagacgaggaccttaaaagttccgctagctttaga gctctcaggagattcccttctgttgtttggagagatcagaggaatggtgctgtgttagtacgatgcagtcagccagagct gggatggtttaactggcgtaacacagaggacgagaagttactagcggcagtgtctgaggcgtgtaacagtaatcctggta cttatcacaaactatcgtcactcagcgaggactctgcctcctcatcagagaatagctcacaaaatggagatatcacagat gataggacccagaagaagatgtttatcatggattgtagatcctacggagcagcattcgctaaccgtgttaaggggggagg agtggagtgtccggagtattaccctagctgtgagatacagttcatgaaccttgccaacattcataccattaggaagtcct ttatagcattacgtacactgtgtagtgggggaatggaccaggctagctggctttccgccctggagaagtccaactggtta actttcttgggaagtatactgaagtctgccagtatagctgtcagtgccatagacaaggagggcagacctgtactcgtaca ctgctcggacggctgggatagaacgtcacagataatatcactgtcagaactgatgctcgacccttactatagaaccatag agggtttccaagttctggtagagagagaatggttagattttggtcacaagttcggtgaccgatgtggtaacagtatcaac atagatgacgttaatgagagatcaccagtgtttctacagtggttagactgtgtctatcagctcatcaaacagttcccatg tgcattccagtttaacgaggcataccttattaagcttgtacagcatacttattcccatttgttcggcacattcctgtgta attccacacaagaacgtctgcgagcggagctggagaaacacacggcatctgtatggtcgttacttcatccctccaacaaa cagttccataataacctgtatagtccaacattggaacaacaggttctataccctcaatcccatgttcgtagtttggttct atgggagtctgtatacctgtctaacaactcttcatcaacaagctgtgaagatccacagcaaagtcccgagaaactacaga atggtctggaaacagagcaagcaggaggcaatctacagaaaacaagatcatgtgaaaatttgctgcttgcctcacaagag caggattcagaattgaatgacggaaagtgtgtggcagtgaatggtgcatccaatgaagcctgtgacgaaaaccatgtcag tgataaatgtaggacaagctgtaatggtgaaatagaagtatttcagaatggtgactcctcagaggtggaagacagtagta atggagtattacaaaaagtgcttagtgttaaacactcacaacatatgtgcaatggaattagtaaaagtgattcttccatt catagtgataggacttttaaaggcaattctagtgagcatcttgttgaatcatcaacggatacagtgactgaagacgataa ccatagttctcagaaaaccgcagaaaatggaagccgtgagaacggatttgtagaaaaatcaccggtggccaaattcaaaa cgttagaaaatagttcaagcataagtaccagcactagtgacatctctagttcacatgttaacatagagcataatatggaa aatctgctaaagttgaagaatatgttatacatatccccgctacaaagttacagtgtgaaaggtggtagcactgggattag gaatagtgtacaaacaaaaagtggatcatattcaccgaccatgctttatcccacaccaaacagttcacagaccccaaact ctacatgtccacccactcctggcacagattacaggtcctcagacactccaattcagcagaagctgagtggtatagggcgc cacctggatgttgacggactgacgacgtttacagaccccgtacagcagagagtccttcagatacagagggactataatca tcagatacagctactgaaaaatcacctagccgccgctaacgctgcactgctacaacatgcctcagcctgcagtggagggg ggagatgtgttcttgatacagaccactttgaattgtgggaatattttctgccacaactgtaccgatttctacgttccact gcctcaccagaatttgatgtctcccgagcgagtgctattttcatcatggtagggttatgtttatccgttggacaacatat ttag |
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Protein
| Protein ID | pfu_aug2.0_807.1_24426.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_807.1_24426.t1 MKDKNSNSWFIYAAKTLEKYDLPSIYDLLEDPVGKEKWKQIVKSAVNAKWIGTIKLQAKGKSSMKHIGDDQYKARRVHFI WQDVSDDTLAVEKAGIKAKLISGGYTNFRKIYINRTKKGRRLCANSVIKKMRTFIISYCAVLSEVRKNFMEKAYADEPAS LECINKSDLFPKKTLVSEDASLQVPFPLLSGEAVEYLGRTSDGVIALSNFRLLTRCKDSFVNLPLGLVELVENRDIFYLH ITCKDATVVRSNNLLLSNNDNVKYSFGKEVDRLKFDLKSTKAWRITYINEEFGVSPTYPKNHIVPSAISDEDLKSSASFR ALRRFPSVVWRDQRNGAVLVRCSQPELGWFNWRNTEDEKLLAAVSEACNSNPGTYHKLSSLSEDSASSSENSSQNGDITD DRTQKKMFIMDCRSYGAAFANRVKGGGVECPEYYPSCEIQFMNLANIHTIRKSFIALRTLCSGGMDQASWLSALEKSNWL TFLGSILKSASIAVSAIDKEGRPVLVHCSDGWDRTSQIISLSELMLDPYYRTIEGFQVLVEREWLDFGHKFGDRCGNSIN IDDVNERSPVFLQWLDCVYQLIKQFPCAFQFNEAYLIKLVQHTYSHLFGTFLCNSTQERLRAELEKHTASVWSLLHPSNK QFHNNLYSPTLEQQVLYPQSHVRSLVLWESVYLSNNSSSTSCEDPQQSPEKLQNGLETEQAGGNLQKTRSCENLLLASQE QDSELNDGKCVAVNGASNEACDENHVSDKCRTSCNGEIEVFQNGDSSEVEDSSNGVLQKVLSVKHSQHMCNGISKSDSSI HSDRTFKGNSSEHLVESSTDTVTEDDNHSSQKTAENGSRENGFVEKSPVAKFKTLENSSSISTSTSDISSSHVNIEHNME NLLKLKNMLYISPLQSYSVKGGSTGIRNSVQTKSGSYSPTMLYPTPNSSQTPNSTCPPTPGTDYRSSDTPIQQKLSGIGR HLDVDGLTTFTDPVQQRVLQIQRDYNHQIQLLKNHLAAANAALLQHASACSGGGRCVLDTDHFELWEYFLPQLYRFLRST ASPEFDVSRASAIFIMVGLCLSVGQHI |
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