Gene
| Gene Model ID | pfu_aug2.0_807.1_24429 |
|---|---|
| Locus | scaffold807.1 : 215954 ... 275282 : - |
| To GenomeBrowser | scaffold807.1:215954..275282 |
| Genes list of scaffold | scaffold807.1 |
| Synonym | pfu_aug1.0_1123.1_29567 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_807.1_24429.t1 | 3 | 1 | Sushi | 6 | 58 | 4.0e-17 | 62.3 | 4.6e-12 | 3.4e-08 | 33.6 |
| pfu_aug2.0_807.1_24429.t1 | 3 | 2 | Sushi | 64 | 119 | 4.0e-17 | 62.3 | 7.3e-13 | 5.4e-09 | 36.2 |
| pfu_aug2.0_807.1_24429.t1 | 2 | 1 | MAM | 132 | 265 | 2.8e-26 | 92.2 | 1.3e-10 | 9.6e-07 | 28.7 |
| pfu_aug2.0_807.1_24429.t1 | 3 | 3 | Sushi | 315 | 326 | 4.0e-17 | 62.3 | 2.0 | 15000.0 | -4.0 |
| pfu_aug2.0_807.1_24429.t1 | 2 | 2 | MAM | 353 | 499 | 2.8e-26 | 92.2 | 1.1e-20 | 8.0e-17 | 61.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_807.1_24429.t1 | gi|156402947|ref|XP_001639851.1| | predicted protein [Nematostella vectensis] | 9.0e-16 |
| pfu_aug2.0_807.1_24429.t1 | gi|637356375|ref|XP_008119312.1| | PREDICTED: IgGFc-binding protein-like [Anolis carolinensis] | 2.0e-15 |
| pfu_aug2.0_807.1_24429.t1 | gi|731249707|ref|XP_010637763.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Fukomys damarensis] | 7.0e-15 |
| pfu_aug2.0_807.1_24429.t1 | gi|634836801|ref|XP_007934965.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Orycteropus afer afer] | 2.0e-14 |
| pfu_aug2.0_807.1_24429.t1 | gi|560985315|ref|XP_006214862.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Vicugna pacos] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_807.1_24429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_807.1_24429.t1 atagttctccaacttcgtgtgattctgccccgatagttgaaaatgcagaggttactggaactggagtattgattggtgac acacgtaattacacatgtgattctggatttacattgaatggtgcgtcagaaatatcatgtggagctgatggaacatggtc agcagccccaacatgcgttgaagatagtgccccaacttcgtgtgattctgccccaatagttgcaaatgcagatgttactg gaactggagtatcgattggtgacacacgtaattacacatgtgattctggatttacattgaatggtgtgtcagaaatatca tgtgaagctgatggaacatggtcagcagccccaacatgcgttgaagactcaactgctgttcaggcgacaatggcttgtag ttttgaggctgacgacgatatgtgttccatgggagtgtgtgatggttttccaaattcagttagctttacggaccatattg atgcggattctgcctaccctgaagtttgtcatgaaggagagaactgtaaggtgattgccctgtctagtatcagacgaaga aatatgaaaggctgtcttgtatctgacttcttaccagatggtgccaaatgtgtaacgttagcctactacatgcacggcga tggatcggggagtttaaacgtctacggtcttgccgatgaaggagacttatacatccttagagtgacagaggacctaggag atcagtggcaaacaataagtctagacgttcctcctagaacaaacgaaaggcatgcagtagaattccttgtgcgaatggcg gtacatgcaatgctaatggtaactgtcaatgcgtcgatggatatacgggatctcgctgcgagcaagaagatatatttaca gcctggaccagaaatgcacgttccgggttgcggcattaatccatgtgtgaatgggggaacatgtggcgcagacttcatat gtgattgtgtaaccggatttgcagggaatcaatgtgaactaatagacggactagtcgatagtttgggttcagaggaatat cgggtatcttccgnggcggacttctgcgagctgatacagacaaatgacgatgatgcaaactggctaagactaagcgatac aaccccttcttacttcaccggtccatctgaagctgctgagggcagcacctacgcatacattgaagcctcggaaatgtctg ttggcgacattgctacactggaaacatcagatgagtttgcaagtggagatagatgtatcagattacagttgcacatgcga ggctattggggtcacatgggtctcttcaaaatttttgctggcaatgatggagcttgggagttggcctatgtagatgcagg tcatcaaggatcagaatggtataacgtagaggtcacgtggaacttggaaaggaaaaaggtacggttatgtgcaattcggg gctatggttggatgagtgacattgctatagacgactttgagatttcaccaggagcttgctaa |
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Protein
| Protein ID | pfu_aug2.0_807.1_24429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_807.1_24429.t1 SSPTSCDSAPIVENAEVTGTGVLIGDTRNYTCDSGFTLNGASEISCGADGTWSAAPTCVEDSAPTSCDSAPIVANADVTG TGVSIGDTRNYTCDSGFTLNGVSEISCEADGTWSAAPTCVEDSTAVQATMACSFEADDDMCSMGVCDGFPNSVSFTDHID ADSAYPEVCHEGENCKVIALSSIRRRNMKGCLVSDFLPDGAKCVTLAYYMHGDGSGSLNVYGLADEGDLYILRVTEDLGD QWQTISLDVPPRTNERHAVEFLVRMAVHAMLMVTVNASMDIRDLAASKKIYLQPGPEMHVPGCGINPCVNGGTCGADFIC DCVTGFAGNQCELIDGLVDSLGSEEYRVSSXADFCELIQTNDDDANWLRLSDTTPSYFTGPSEAAEGSTYAYIEASEMSV GDIATLETSDEFASGDRCIRLQLHMRGYWGHMGLFKIFAGNDGAWELAYVDAGHQGSEWYNVEVTWNLERKKVRLCAIRG YGWMSDIAIDDFEISPGAC |
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