Gene
| Gene Model ID | pfu_aug2.0_81.1_03572 |
|---|---|
| Locus | scaffold81.1 : 284665 ... 299423 : - |
| To GenomeBrowser | scaffold81.1:284665..299423 |
| Genes list of scaffold | scaffold81.1 |
| Synonym | pfu_aug1.0_444.1_50867 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein ndnf | GO:0007399 GO:0044763 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_81.1_03572.t1 | 2 | 1 | DUF2369 | 173 | 218 | 4.0e-14 | 52.4 | 6.7e-05 | 0.5 | 9.4 |
| pfu_aug2.0_81.1_03572.t1 | 2 | 2 | DUF2369 | 278 | 406 | 4.0e-14 | 52.4 | 6.2e-15 | 4.6e-11 | 42.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_81.1_03572.t1 | gi|505838501|ref|XP_004612784.1| | PREDICTED: protein NDNF [Sorex araneus] | 3.0e-40 |
| pfu_aug2.0_81.1_03572.t1 | gi|332244430|ref|XP_003271377.1| | PREDICTED: protein NDNF isoform X2 [Nomascus leucogenys] | 6.0e-40 |
| pfu_aug2.0_81.1_03572.t1 | gi|332244432|ref|XP_003271378.1| | PREDICTED: protein NDNF isoform X1 [Nomascus leucogenys] | 6.0e-40 |
| pfu_aug2.0_81.1_03572.t1 | gi|114595878|ref|XP_001151746.1| | PREDICTED: protein NDNF [Pan troglodytes] | 7.0e-40 |
| pfu_aug2.0_81.1_03572.t1 | gi|724816718|ref|XP_010360088.1| | PREDICTED: protein NDNF [Rhinopithecus roxellana] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_81.1_03572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_81.1_03572.t1 atgcttcgaaacctacactctattggatacttgatactcgtaataaagttgttgattatactaattgtgtgcccacaagg ggcactaaccgttccatatcatcacgactttgaattcgagccagaggcggataaaactatattttacgattcgaatatcc ttcctgaaagtaaagaagtttcaaaataccttctgctcaacagatctgaaaaagtcctattcattccacaaggaaacaac acgcctatctatatcgtcataacgccatgtgcatccgctgtagagtggaccgtttctcataaaagtatcgtaccaaccaa tgaaaacgaagattcctcgaattcactgggattcaacacggttataccaaaaacaaagactttatacagctacgcaggaa gagatcaacataaatttgagctagaatcaggggaaatgggattttatactgtggatattaaatctacagaaagtgattcg tatgttaaattttatggaacaacattccgaccaggaatttacccaaaattgccaccagatagtacagttaagacaaaaaa ggtgaagaggaaaagtattacattcgaatggactgccagtccggaaatgacgccatttgacaatcttatagaatatgcag ttgctgtgaataggaaaaggccataccaaacacattgttcggttatggcccatcttaatggtgacaaaaagcctcgtcct cccaaaaatgcggggttcatgttcccaagtgagaccgaaagggataaaattcttcgggaaaatgcagcgcccatttcccc ggtaagaaaaggagaaatattttaccggcatgttgggagaaaaactcgtttaacatttaacagtgccagaccaggtcgta aatacattataaatgtgtatgcaattaatattaaaacaaatagaactagtgcgtatcaaagtatagaagtgaggactaga aaagttaagaaagcaaagaaaacgaagcgactaaaagatggtcgcatggaaattttctcgctagataagccaaagaaaac tgtaacataccactacaagacaaaaaagccaaaacagaatatgcttcttgccattcatgtctgtagtggaaaagtgaata taaaagtcagtagcaagggcaaaaaacaaatatttagaaaagagagtaaagggttacaaaacctttatattgaaggattt acccaaagacaagtatttcatagccgtcacaaactctcgaaaaggaaaagggagtgtgcgtcttttcgtaagcaaaagac cagaaaaattccagtatccgaaattaccaaaagagactaa |
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Protein
| Protein ID | pfu_aug2.0_81.1_03572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_81.1_03572.t1 MLRNLHSIGYLILVIKLLIILIVCPQGALTVPYHHDFEFEPEADKTIFYDSNILPESKEVSKYLLLNRSEKVLFIPQGNN TPIYIVITPCASAVEWTVSHKSIVPTNENEDSSNSLGFNTVIPKTKTLYSYAGRDQHKFELESGEMGFYTVDIKSTESDS YVKFYGTTFRPGIYPKLPPDSTVKTKKVKRKSITFEWTASPEMTPFDNLIEYAVAVNRKRPYQTHCSVMAHLNGDKKPRP PKNAGFMFPSETERDKILRENAAPISPVRKGEIFYRHVGRKTRLTFNSARPGRKYIINVYAINIKTNRTSAYQSIEVRTR KVKKAKKTKRLKDGRMEIFSLDKPKKTVTYHYKTKKPKQNMLLAIHVCSGKVNIKVSSKGKKQIFRKESKGLQNLYIEGF TQRQVFHSRHKLSKRKRECASFRKQKTRKIPVSEITKRD |
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