Gene
| Gene Model ID | pfu_aug2.0_81.1_03576 |
|---|---|
| Locus | scaffold81.1 : 388346 ... 400833 : - |
| To GenomeBrowser | scaffold81.1:388346..400833 |
| Genes list of scaffold | scaffold81.1 |
| Synonym | pfu_aug1.0_12256.1_03211 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| guanine nucleotide-binding protein subunit beta-2-like 1-like | GO:0001525 GO:0001649 GO:0001891 GO:0001934 GO:0003908 GO:0004872 GO:0005080 GO:0005634 GO:0005739 GO:0005829 GO:0005856 GO:0006281 GO:0006919 GO:0008200 GO:0008656 GO:0015935 GO:0017148 GO:0019903 GO:0030178 GO:0030292 GO:0030308 GO:0030335 GO:0030425 GO:0030496 GO:0030822 GO:0030971 GO:0032259 GO:0032436 GO:0032464 GO:0042169 GO:0042803 GO:0043025 GO:0043547 GO:0044822 GO:0048471 GO:0048511 GO:0050765 GO:0051302 GO:0051343 GO:0051726 GO:0051898 GO:0051901 GO:0060027 GO:0061099 GO:0070062 GO:0090003 GO:1903208 GO:2000114 GO:2000543 GO:2001244 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_81.1_03576.t1 | 6 | 1 | WD40 | 5 | 40 | 0.0 | 180.3 | 1.7e-09 | 8.5e-06 | 25.4 |
| pfu_aug2.0_81.1_03576.t1 | 6 | 2 | WD40 | 50 | 87 | 0.0 | 180.3 | 7.4e-13 | 3.7e-09 | 36.1 |
| pfu_aug2.0_81.1_03576.t1 | 6 | 3 | WD40 | 94 | 129 | 0.0 | 180.3 | 6.9e-14 | 3.4e-10 | 39.3 |
| pfu_aug2.0_81.1_03576.t1 | 6 | 4 | WD40 | 140 | 174 | 0.0 | 180.3 | 1.0e-12 | 5.1e-09 | 35.6 |
| pfu_aug2.0_81.1_03576.t1 | 6 | 5 | WD40 | 179 | 216 | 0.0 | 180.3 | 7.8e-13 | 3.8e-09 | 36.0 |
| pfu_aug2.0_81.1_03576.t1 | 6 | 6 | WD40 | 220 | 256 | 0.0 | 180.3 | 3.3e-07 | 0.0016 | 18.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_81.1_03576.t1 | gi|318082878|ref|NP_001187435.1| | guanine nucleotide-binding protein subunit beta-2-like 1 [Ictalurus punctatus] | 0.0 |
| pfu_aug2.0_81.1_03576.t1 | gi|597761237|ref|XP_007244608.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-2-like 1-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_81.1_03576.t1 | gi|556956111|ref|XP_005989393.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-2-like 1-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_81.1_03576.t1 | gi|573887994|ref|XP_006631768.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-2-like 1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_81.1_03576.t1 | gi|148231875|ref|NP_001086465.1| | uncharacterized protein LOC446289 [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_81.1_03576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_81.1_03576.t1 atgactctgagaggaacccttcaagggcatggaggatgggttactcaaatagccacaacaccacaatatcctgacatggt gttgtctgcatcaagagataagagtttgatcatgtggaaactgacaagagacgatgctaattacggagtaccgctgaggt gtctgaaaggacacggtcactttgtatcagatgtagtgatgtcatcagatggacagtttgcattgtcaggatcctgggac aagtccctccgactctgggatttgagtgctggtacaacaactcgtctattctgtaatcacgagaaagatgtcatgagcgt agccttctccgctgacaacagacagattgtatctggatccagagacaagtccattaaactgtggaacacactgggagtgt gcaagtacaccattcaggatgaaggccacaacgattgggcctcctgtgtacgtttctctccaaacacagcaaaccccatc atcgtgtcatgtggatgggataaaatggtcaaggtatggaatttgaccaactgcaagctaaagaccaaccacattggaca taatggatacctgaattgtgttacagtatcaccagatggttcactgtgtgcctcaggtggaaaggatggtcaagctatgt tgtgggatctgaacgaaggcaaacatctgtacaccctggacggaggtgatgtcatcaattccctgtgcttcagtcccaac agatactggctctgtgcagccactggacctagcatcaaaatctggaaaaccccaaaccaatttattatgcatcaaatggg tgtgtcggaaattaaatcctcatcagtgatgcttccaagcaaaagtgattttcttaagccgccaaaacgcacctga |
|
Protein
| Protein ID | pfu_aug2.0_81.1_03576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_81.1_03576.t1 MTLRGTLQGHGGWVTQIATTPQYPDMVLSASRDKSLIMWKLTRDDANYGVPLRCLKGHGHFVSDVVMSSDGQFALSGSWD KSLRLWDLSAGTTTRLFCNHEKDVMSVAFSADNRQIVSGSRDKSIKLWNTLGVCKYTIQDEGHNDWASCVRFSPNTANPI IVSCGWDKMVKVWNLTNCKLKTNHIGHNGYLNCVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDVINSLCFSPN RYWLCAATGPSIKIWKTPNQFIMHQMGVSEIKSSSVMLPSKSDFLKPPKRT |
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