Gene
| Gene Model ID | pfu_aug2.0_81.1_03578 |
|---|---|
| Locus | scaffold81.1 : 422823 ... 429123 : - |
| To GenomeBrowser | scaffold81.1:422823..429123 |
| Genes list of scaffold | scaffold81.1 |
| Synonym | pfu_aug1.0_12256.1_03213 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_81.1_03578.t1 | 2 | 1 | EF-hand_7 | 21 | 53 | 8.3e-11 | 41.8 | 3.1e-05 | 0.046 | 13.8 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 1 | EF-hand_6 | 31 | 55 | 4.8e-09 | 35.3 | 6.7e-05 | 0.099 | 12.5 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 1 | EF-hand_1 | 32 | 54 | 8.2e-08 | 31.0 | 0.037 | 55.0 | 3.4 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 2 | EF-hand_1 | 50 | 73 | 8.2e-08 | 31.0 | 5.1e-06 | 0.0076 | 15.4 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 2 | EF-hand_6 | 51 | 74 | 4.8e-09 | 35.3 | 1.4e-05 | 0.021 | 14.7 |
| pfu_aug2.0_81.1_03578.t1 | 2 | 2 | EF-hand_7 | 53 | 126 | 8.3e-11 | 41.8 | 7.5e-09 | 1.1e-05 | 25.4 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 3 | EF-hand_1 | 82 | 103 | 8.2e-08 | 31.0 | 0.00012 | 0.18 | 11.1 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 3 | EF-hand_6 | 83 | 103 | 4.8e-09 | 35.3 | 0.00051 | 0.76 | 9.8 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 4 | EF-hand_1 | 106 | 127 | 8.2e-08 | 31.0 | 0.00015 | 0.23 | 10.8 |
| pfu_aug2.0_81.1_03578.t1 | 4 | 4 | EF-hand_6 | 108 | 128 | 4.8e-09 | 35.3 | 0.0038 | 5.6 | 7.1 |
Transcript
| Transcript ID | pfu_aug2.0_81.1_03578.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_81.1_03578.t1 atgttgctctgtattgcagtagctgttctgttttctctctgctcgagccagcatgatcatttgaatgcacatgaaatagc actgcatgtggatgacgcctttgtgaagttggacgtgaaccctaaggacggacaacttgagatggacgaactctccaagg tattcgaccttagagacgaagatcatgacggaagcttgagcagggcagaatttgaaaaacacgcttcaaacacaccaata cgtgatcgactatttgactttttcgatgcaaaccacgatcatagtcttgggaagacagagtttgttgatgacaacattgc tatgatggataaagatagtgatcatattgtaaccaggaaagaattcgatcatttctacacacagattgttaatcatatgg ttcatgatatccaacacgttgatcacggcaatcatggacaccatggaaattag |
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Protein
| Protein ID | pfu_aug2.0_81.1_03578.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_81.1_03578.t1 MLLCIAVAVLFSLCSSQHDHLNAHEIALHVDDAFVKLDVNPKDGQLEMDELSKVFDLRDEDHDGSLSRAEFEKHASNTPI RDRLFDFFDANHDHSLGKTEFVDDNIAMMDKDSDHIVTRKEFDHFYTQIVNHMVHDIQHVDHGNHGHHGN |
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