Gene
| Gene Model ID | pfu_aug2.0_810.1_01154 |
|---|---|
| Locus | scaffold810.1 : 143528 ... 173925 : - |
| To GenomeBrowser | scaffold810.1:143528..173925 |
| Genes list of scaffold | scaffold810.1 |
| Synonym | pfu_aug1.0_14318.1_25291 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_810.1_01154.t1 | 2 | 1 | I-set | 58 | 138 | 1.0e-20 | 73.3 | 4.2e-11 | 5.7e-08 | 32.5 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 1 | Ig_2 | 60 | 149 | 1.4e-18 | 66.7 | 1.7e-08 | 2.3e-05 | 24.4 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 1 | V-set | 62 | 138 | 3.7e-17 | 62.2 | 2.4e-11 | 3.3e-08 | 33.4 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 1 | ig | 64 | 134 | 9.6e-14 | 51.2 | 6.5e-05 | 0.087 | 12.9 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 1 | Ig_3 | 67 | 136 | 4.5e-11 | 43.0 | 3.6e-05 | 0.048 | 14.1 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 2 | I-set | 156 | 236 | 1.0e-20 | 73.3 | 4.4e-13 | 5.9e-10 | 38.8 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 2 | V-set | 159 | 240 | 3.7e-17 | 62.2 | 4.1e-09 | 5.5e-06 | 26.2 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 2 | Ig_3 | 159 | 234 | 4.5e-11 | 43.0 | 1.6e-08 | 2.1e-05 | 24.9 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 2 | Ig_2 | 160 | 244 | 1.4e-18 | 66.7 | 2.0e-13 | 2.7e-10 | 40.2 |
| pfu_aug2.0_810.1_01154.t1 | 2 | 2 | ig | 165 | 233 | 9.6e-14 | 51.2 | 1.9e-11 | 2.6e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_810.1_01154.t1 | gi|524872930|ref|XP_005093220.1| | PREDICTED: vascular endothelial growth factor receptor 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_810.1_01154.t1 | gi|676477216|ref|XP_009061041.1| | hypothetical protein LOTGIDRAFT_126369, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_810.1_01154.t1 | gi|524892918|ref|XP_005102982.1| | PREDICTED: lachesin-like, partial [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_810.1_01154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_810.1_01154.t1 atgacttgccatcgaagatgtaacaatttgttacaattacttgaaagtttgtttccatgctatggagtgaaagtcatcaa ttttggaattaatttgtttctgatctgcattcttgcagatatagcgctttgccaacttgcagcggaggcggagtttgttg acatgcagctcaattatacatatgatcagggtgatctcgccacattgtactgcagggtgaataacctcggcaaaagatcg gttatatggcgcagaacctcccaacccagtcccatttcagttggtactgacatattcgctcccgatgatagataccacgt acaacacttaccataccggggcaactggaacttgttgatcaagaacgtcaatgccagagattctggcgtgtacgagtgcc aaataagtgctaaagagagggcgggatccagacgattggttctattgaatgttattgaaatacaaatttcgggtacaaca tttgtagaaataggtagtaccatcacactaacttgcaacgcctcctctatggactttccgtccgatgaaattgattggtt tagagacggacatcctctaaaagacaatttcaaaattcaaatttccaaacatgtatttcttgttggaaagtcaatacata gtgttttgacggtaaaggaagcaacattaaaggacgctgggacttatgtatgccaggcttcagaccgtcaaattaccagc accaaagtccatgttctcagtgcacgctcccaaaattcaaaacgaggcacagataacaagggttcttcctcaagaaaggg ctttaattcgaacattgcatatccactgaaacattcattttgtactatagtgatatccctattgttagtttcgtataacc tacatcgaagaacttga |
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Protein
| Protein ID | pfu_aug2.0_810.1_01154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_810.1_01154.t1 MTCHRRCNNLLQLLESLFPCYGVKVINFGINLFLICILADIALCQLAAEAEFVDMQLNYTYDQGDLATLYCRVNNLGKRS VIWRRTSQPSPISVGTDIFAPDDRYHVQHLPYRGNWNLLIKNVNARDSGVYECQISAKERAGSRRLVLLNVIEIQISGTT FVEIGSTITLTCNASSMDFPSDEIDWFRDGHPLKDNFKIQISKHVFLVGKSIHSVLTVKEATLKDAGTYVCQASDRQITS TKVHVLSARSQNSKRGTDNKGSSSRKGFNSNIAYPLKHSFCTIVISLLLVSYNLHRRT |
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