Gene
| Gene Model ID | pfu_aug2.0_8102.1_09652 |
|---|---|
| Locus | scaffold8102.1 : 1 ... 11508 : + |
| To GenomeBrowser | scaffold8102.1:1..11508 |
| Genes list of scaffold | scaffold8102.1 |
| Synonym | pfu_aug1.0_8418.1_67855 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8102.1_09652.t1 | 1 | 1 | FtsJ | 1 | 89 | 8.4e-16 | 58.4 | 2.2e-19 | 1.6e-15 | 57.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8102.1_09652.t1 | gi|260787461|ref|XP_002588771.1| | hypothetical protein BRAFLDRAFT_125627 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_8102.1_09652.t1 | gi|573907610|ref|XP_006641524.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_8102.1_09652.t1 | gi|742168089|ref|XP_010849199.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 [Bison bison bison] | 0.0 |
| pfu_aug2.0_8102.1_09652.t1 | gi|555975227|ref|XP_005899597.1| | PREDICTED: ftsJ methyltransferase domain-containing protein 1 [Bos mutus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_8102.1_09652.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8102.1_09652.t1 gtgacagcagatggttctatagactgtcaggacgacccggcagagcaggaattagtcgtgtcccgtctacacgtctgcga ggctctcaccaccatgtcaatccttgctcccgggggacacatggtccttaaaaagttcactatgtttgagtgtgatacaa tttgtctcatgtacatattaaactgtatgttctcagaggtccacgtgataaaaccagcaagcagtaagagtggtaactct gaggtttacattgtatgtaaggagttccttgcccctgacggacacaaactgctgatcgataggatgtgtgagatgtactt cgactcagattcaaacttgtctacaccattgaaatgtatgtttgccatcgatcaaattcctgagtcattcctacacaagc atatcaacatctgtacgttattcaccaatctacagggagagacaatccagaataaccttgaccattacccggtcctctcg gacaagtaccgagcatggattgaaagtgtcaaggagtattgtgcagagttctattttaatctatacaatgtacggccagt acctgaccattgtcgagtggtaccgttccggacacagaaaaagataaagaaattaaatggattcagtacaagaggcagca aatttagagataagaaaagaagaaatgggacatttaatgacagacaaatggttgcacggttaccatggaaacaaagaata caacaaatggagaaattagagatttctccaatacaccctgtatggtttaag |
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Protein
| Protein ID | pfu_aug2.0_8102.1_09652.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8102.1_09652.t1 VTADGSIDCQDDPAEQELVVSRLHVCEALTTMSILAPGGHMVLKKFTMFECDTICLMYILNCMFSEVHVIKPASSKSGNS EVYIVCKEFLAPDGHKLLIDRMCEMYFDSDSNLSTPLKCMFAIDQIPESFLHKHINICTLFTNLQGETIQNNLDHYPVLS DKYRAWIESVKEYCAEFYFNLYNVRPVPDHCRVVPFRTQKKIKKLNGFSTRGSKFRDKKRRNGTFNDRQMVARLPWKQRI QQMEKLEISPIHPVWFK |
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